e_gw.89.25.1 (Branchiostoma floridae)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 e_gw.89.25.1 T341167_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.758 0.764
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.758 0.764
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.758 0.764
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.758 0.764
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.758 0.764
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.758 0.764
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.758 0.764
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.758 0.764
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.758 0.764
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.740 0.753
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.740 0.753
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.740 0.753
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.89.25.1 T-box 8 190

Links

Other T-box family TFs
Other Branchiostoma floridae TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tbx5b Tetraodon nigroviridis ENSTNIG00000015908 I 0.776
tbx4 Oryzias latipes ENSORLG00000014806 I 0.759
TBX5 Myotis lucifugus ENSMLUG00000016530 I 0.758
TBX5 Loxodonta africana ENSLAFG00000010125 I 0.758
TBX5 Meleagris gallopavo ENSMGAG00000010075 I 0.758
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I 0.758
TBX5 Gorilla gorilla ENSGGOG00000013775 I 0.758
TBX5 Felis catus ENSFCAG00000005574 I 0.758
TBX5 Homo sapiens ENSG00000089225 D 0.758
TBX5 Gallus gallus ENSGALG00000008253 I 0.758
TBX5 Macaca mulatta ENSMMUG00000016202 I 0.758
TBX5 Tursiops truncatus ENSTTRG00000000980 I 0.758
TBX5 Sus scrofa ENSSSCG00000009867 I 0.758
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I 0.758
TBX5 Otolemur garnettii ENSOGAG00000016204 I 0.758
TBX5 Pan troglodytes ENSPTRG00000005496 I 0.758
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I 0.758
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I 0.758
Tbx5 Rattus norvegicus ENSRNOG00000001399 I 0.758
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I 0.758
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I 0.758
Tbx5 Mus musculus ENSMUSG00000018263 D 0.758
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I 0.758
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I 0.758
TBX5 Bos taurus ENSBTAG00000011384 I 0.758
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I 0.758
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I 0.758
ENSP00000384152 Macaca fascicularis ENSP00000384152 I 0.758
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.758
TBX5 Cavia porcellus ENSCPOG00000014558 I 0.758
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I 0.758
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I 0.758
Ogr05323 Ophisaurus gracilis Ogr05323 I 0.758
TBX5 Canis familiaris ENSCAFG00000009189 I 0.758
TBX5 Equus caballus ENSECAG00000017114 I 0.758
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I 0.758
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I 0.758
ENSPFOG00000022507 Poecilia formosa ENSPFOG00000022507 I 0.755
ENSOARG00000016309 Ovis aries ENSOARG00000016309 I 0.755
ENSXMAG00000005717 Xiphophorus maculatus ENSXMAG00000005717 I 0.755
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I 0.754
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I 0.754
tbx5a Oryzias latipes ENSORLG00000007339 I 0.754
tbx5a Danio rerio ENSDARG00000024894 I 0.754
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I 0.754
TBX5 Monodelphis domestica ENSMODG00000012045 I 0.753
tbx5 Oryzias latipes ENSORLG00000008185 I 0.750
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I 0.750
ENSPFOG00000016001 Poecilia formosa ENSPFOG00000016001 I 0.750
tbx5.L Xenopus laevis XB-GENE-865653 I 0.750
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I 0.750
tbx5 Xenopus tropicalis XB-GENE-486855 I 0.750
ENSAMXG00000007100 Astyanax mexicanus ENSAMXG00000007100 I 0.746
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I 0.746
ENSMICG00000008299 Microcebus murinus ENSMICG00000008299 I 0.744
tbx5b Gasterosteus aculeatus ENSGACG00000009550 I 0.741
tbx5a Gasterosteus aculeatus ENSGACG00000016787 I 0.741
tbx5a Takifugu rubripes ENSTRUG00000015054 I 0.741
tbx5a Tetraodon nigroviridis ENSTNIG00000009036 I 0.741
ENSPPYG00000008800 Pongo abelii ENSPPYG00000008800 I 0.740
ENSP00000377435 Macaca fascicularis ENSP00000377435 I 0.740
ENSP00000377435-D1 Bos grunniens ENSP00000377435-D1 I 0.740
TBX4 Tursiops truncatus ENSTTRG00000004552 I 0.740
Alligator_sinensis_CCG002049.1 Alligator sinensis Alligator_sinensis_CCG002049.1 I 0.740
ENSSTOG00000009394 Ictidomys tridecemlineatus ENSSTOG00000009394 I 0.740
TBX4 Sus scrofa ENSSSCG00000022980 I 0.740
TBX4 Pteropus vampyrus ENSPVAG00000016866 I 0.740
Tbx4 Rattus norvegicus ENSRNOG00000003544 I 0.740
ENSSHAG00000012638 Sarcophilus harrisii ENSSHAG00000012638 I 0.740
TBX4 Pan troglodytes ENSPTRG00000009491 I 0.740
ENSMPUG00000015166 Mustela putorius furo ENSMPUG00000015166 I 0.740
TBX4 Erinaceus europaeus ENSEEUG00000009722 I 0.740
TBX4 Equus caballus ENSECAG00000024414 I 0.740
ENSFALG00000005474 Ficedula albicollis ENSFALG00000005474 I 0.740
TBX4 Felis catus ENSFCAG00000026664 I 0.740
ENSPANG00000022155 Papio anubis ENSPANG00000022155 I 0.740
TBX4 Dasypus novemcinctus ENSDNOG00000035197 I 0.740
ENSCPOG00000001044 Cavia porcellus ENSCPOG00000001044 I 0.740
ENSAPLG00000008848 Anas platyrhynchos ENSAPLG00000008848 I 0.740
ENSAMEG00000008802 Ailuropoda melanoleuca ENSAMEG00000008802 I 0.740
TBX4 Bos taurus ENSBTAG00000009968 I 0.740
TBX4 Canis familiaris ENSCAFG00000017740 I 0.740
TBX4 Callithrix jacchus ENSCJAG00000001281 I 0.740
TBX4 Gorilla gorilla ENSGGOG00000013904 I 0.740
TBX4 Homo sapiens ENSG00000121075 D 0.740
Tbx4 Mus musculus ENSMUSG00000000094 D 0.740
ENSLACG00000014713 Latimeria chalumnae ENSLACG00000014713 I 0.740
ENSNLEG00000000427 Nomascus leucogenys ENSNLEG00000000427 I 0.740
TBX4 Ornithorhynchus anatinus ENSOANG00000011525 I 0.740
TBX4 Oryctolagus cuniculus ENSOCUG00000010834 I 0.740
TBX4 Otolemur garnettii ENSOGAG00000007474 I 0.740
TBX4 Macaca mulatta ENSMMUG00000022580 I 0.740
TBX4 Loxodonta africana ENSLAFG00000006608 I 0.740
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.740
TBX4 Microcebus murinus ENSMICG00000016673 I 0.740
TBX4 Myotis lucifugus ENSMLUG00000011682 I 0.740
TBX4 Ochotona princeps ENSOPRG00000012257 I 0.740
tbx5b Danio rerio ENSDARG00000092060 I 0.738
tbx4 Danio rerio ENSDARG00000030058 I 0.737
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I 0.736