CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BAH04511
(
Xenopus tropicalis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
BAH04511
T341209_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.735
0.580
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN
NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.735
0.580
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BAH04511
T-box
50
230
ASLEDQDLWAQFHQEGTEMIITKSGRRMFPQCKIRLFGLHPYAKYMLLVDFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDAICFQKLKLTNNTLDQQGHIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTAVTAYQNEKITKLKINHNPFAKGFRE
Links
Other
T-box
family TFs
Other
Xenopus tropicalis
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
vegt
Xenopus tropicalis
XB-GENE-1033829
I
0.920
BAH04512
Xenopus tropicalis
BAH04512
I
0.920
vegt.S
Xenopus laevis
XB-GENE-1033836
N
0.910
vegt.L
Xenopus laevis
XB-GENE-6252142
N
0.903
ENSLOCG00000006550
Lepisosteus oculatus
ENSLOCG00000006550
I
0.822
tbx16
Oryzias latipes
ENSORLG00000014344
I
0.813
ENSPFOG00000017869
Poecilia formosa
ENSPFOG00000017869
I
0.809
ENSXMAG00000008530
Xiphophorus maculatus
ENSXMAG00000008530
I
0.808
Alligator_sinensis_CCG014169.1
Alligator sinensis
Alligator_sinensis_CCG014169.1
N
0.798
tbx16
Danio rerio
ENSDARG00000007329
I
0.796
ENSAMXG00000001195
Astyanax mexicanus
ENSAMXG00000001195
I
0.789
tbx16
Gasterosteus aculeatus
ENSGACG00000012454
I
0.782
Cmyd_10005826
Chelonia mydas
Cmyd_10005826
I
0.776
ENSLACG00000012884
Latimeria chalumnae
ENSLACG00000012884
I
0.774
ENSONIG00000011030
Oreochromis niloticus
ENSONIG00000011030
I
0.773
ENSONIG00000003732
Oreochromis niloticus
ENSONIG00000003732
I
0.768
ENSFALG00000007252
Ficedula albicollis
ENSFALG00000007252
I
0.762
TBX6
Taeniopygia guttata
ENSTGUG00000010188
I
0.762
Aan_R008261
Calypte anna
Aan_R008261
I
0.762
Afo_R009018
Aptenodytes forsteri
Afo_R009018
I
0.762
TBX6
Gallus gallus
ENSGALG00000006374
I
0.762
Brh_R011905
Buceros rhinoceros
Brh_R011905
I
0.762
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
0.762
Tal_R011807
Tyto alba
Tal_R011807
I
0.762
Gfo_R008747
Geospiza fortis
Gfo_R008747
I
0.762
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
0.762
tbx16
Takifugu rubripes
ENSTRUG00000016468
I
0.760
ENSACAG00000008612
Anolis carolinensis
ENSACAG00000008612
N
0.752
Pvit_03730
Pogona vitticeps
Pvit_03730
I
0.750
HelroG63904
Helobdella robusta
HelroG63904
I
0.746
TTRE_0000604401
Trichuris trichiura
TTRE_0000604401
I
0.745
D918_00588
Trichuris suis
D918_00588
I
0.745
TMUE_s0121001900
Trichuris muris
TMUE_s0121001900
I
0.745
ENSGMOG00000011095
Gadus morhua
ENSGMOG00000011095
N
0.742
CGI_10016324
Crassostrea gigas
CGI_10016324
I
0.741
SPAL_0001704100
Strongyloides papillosus
SPAL_0001704100
I
0.738
SSTP_0000270400
Strongyloides stercoralis
SSTP_0000270400
I
0.738
TBX3
Monodelphis domestica
ENSMODG00000012059
I
0.738
SVE_1909900
Strongyloides venezuelensis
SVE_1909900
I
0.738
tbx6
Xenopus tropicalis
XB-GENE-6257419
I
0.736
tbx3
Xenopus tropicalis
XB-GENE-1018231
I
0.735
tbx3.L
Xenopus laevis
XB-GENE-6252891
I
0.735
tbx3.S
Xenopus laevis
XB-GENE-1018237
I
0.735
ENSXMAG00000005715
Xiphophorus maculatus
ENSXMAG00000005715
I
0.735
ENSGMOG00000002896
Gadus morhua
ENSGMOG00000002896
I
0.735
ENSLACG00000015364
Latimeria chalumnae
ENSLACG00000015364
I
0.735
TBX2
Gasterosteus aculeatus
ENSGACG00000013575
D
0.735
tbx2b
Danio rerio
ENSDARG00000006120
I
0.735
ENSAMXG00000001528
Astyanax mexicanus
ENSAMXG00000001528
I
0.735
ENSONIG00000010454
Oreochromis niloticus
ENSONIG00000010454
I
0.735
TBX2
Oryzias latipes
ENSORLG00000014792
I
0.735
AAI69776
Xenopus laevis
AAI69776
I
0.735
ABC75836
Xenopus laevis
ABC75836
I
0.735
Pvit_13524
Pogona vitticeps
Pvit_13524
I
0.735
TBX2
Takifugu rubripes
ENSTRUG00000008297
D
0.735
ENSPFOG00000016384
Poecilia formosa
ENSPFOG00000016384
I
0.735
BAC20262
Xenopus laevis
BAC20262
I
0.735