BAH04511 (Xenopus tropicalis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 BAH04511 T341209_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.735 0.580
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.735 0.580
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BAH04511 T-box 50 230

Links

Other T-box family TFs
Other Xenopus tropicalis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG014169.1 Alligator sinensis Alligator_sinensis_CCG014169.1 N 0.798
ENSAPLG00000006398 Anas platyrhynchos ENSAPLG00000006398 I 0.762
ENSACAG00000008612 Anolis carolinensis ENSACAG00000008612 N 0.752
Afo_R009018 Aptenodytes forsteri Afo_R009018 I 0.762
ENSAMXG00000001195 Astyanax mexicanus ENSAMXG00000001195 I 0.789
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.735
Brh_R011905 Buceros rhinoceros Brh_R011905 I 0.762
Aan_R008261 Calypte anna Aan_R008261 I 0.762
Cmyd_10005826 Chelonia mydas Cmyd_10005826 I 0.776
CGI_10016324 Crassostrea gigas CGI_10016324 I 0.741
tbx16 Danio rerio ENSDARG00000007329 I 0.796
tbx2b Danio rerio ENSDARG00000006120 I 0.735
ENSFALG00000007252 Ficedula albicollis ENSFALG00000007252 I 0.762
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.735
ENSGMOG00000011095 Gadus morhua ENSGMOG00000011095 N 0.742
TBX6 Gallus gallus ENSGALG00000006374 I 0.762
tbx16 Gasterosteus aculeatus ENSGACG00000012454 I 0.782
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.735
Gfo_R008747 Geospiza fortis Gfo_R008747 I 0.762
HelroG63904 Helobdella robusta HelroG63904 I 0.746
ENSLACG00000012884 Latimeria chalumnae ENSLACG00000012884 I 0.774
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.735
ENSLOCG00000006550 Lepisosteus oculatus ENSLOCG00000006550 I 0.822
TBX6 Meleagris gallopavo ENSMGAG00000007663 I 0.762
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.738
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.735
ENSONIG00000011030 Oreochromis niloticus ENSONIG00000011030 I 0.773
ENSONIG00000003732 Oreochromis niloticus ENSONIG00000003732 I 0.768
tbx16 Oryzias latipes ENSORLG00000014344 I 0.813
TBX2 Oryzias latipes ENSORLG00000014792 I 0.735
ENSPFOG00000017869 Poecilia formosa ENSPFOG00000017869 I 0.809
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.735
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.735
Pvit_03730 Pogona vitticeps Pvit_03730 I 0.750
SPAL_0001704100 Strongyloides papillosus SPAL_0001704100 I 0.738
SSTP_0000270400 Strongyloides stercoralis SSTP_0000270400 I 0.738
SVE_1909900 Strongyloides venezuelensis SVE_1909900 I 0.738
TBX6 Taeniopygia guttata ENSTGUG00000010188 I 0.762
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.735
tbx16 Takifugu rubripes ENSTRUG00000016468 I 0.760
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.745
D918_00588 Trichuris suis D918_00588 I 0.745
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.745
Tal_R011807 Tyto alba Tal_R011807 I 0.762
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.735
vegt.S Xenopus laevis XB-GENE-1033836 N 0.910
vegt.L Xenopus laevis XB-GENE-6252142 N 0.903
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.735
ABC75836 Xenopus laevis ABC75836 I 0.735
AAI69776 Xenopus laevis AAI69776 I 0.735
BAC20262 Xenopus laevis BAC20262 I 0.735
tbx6 Xenopus tropicalis XB-GENE-6257419 I 0.736
vegt Xenopus tropicalis XB-GENE-1033829 I 0.920
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.735
BAH04512 Xenopus tropicalis BAH04512 I 0.920
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.735
ENSXMAG00000008530 Xiphophorus maculatus ENSXMAG00000008530 I 0.808