LCUP005945 (Lucilia cuprina)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 LCUP005945 T341229_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Doc2
M03992_2.00
Drosophila melanogaster
DRGGTGTBAN

NTVACACCYH
SELEX
Nitta et al.(2015)
Doc2_1
0.883 0.906
Doc2
M03993_2.00
Drosophila melanogaster
NAGGTGTBAN

NTVACACCTN
SELEX
Nitta et al.(2015)
Doc2_2
0.883 0.906
Doc2
M06454_2.00
Drosophila melanogaster
ARGYGTGAA

TTCACRCYT
B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956
0.883 0.906
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD

HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.873 0.901
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN

NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.873 0.901
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.735 0.608
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.735 0.608
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP005945-PA T-box 61 241

Links

Other T-box family TFs
Other Lucilia cuprina TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G47562 Brachypodium distachyon BRADI1G47562 N 0.000
TRIUR3_09409 Triticum urartu TRIUR3_09409 N 0.000
Traes_7BS_D06222817 Triticum aestivum Traes_7BS_D06222817 N 0.000
Traes_7AS_73BC102D3 Triticum aestivum Traes_7AS_73BC102D3 N 0.000
Si006005m.g Setaria italica Si006005m.g N 0.000
Sb10g005480 Sorghum bicolor Sb10g005480 N 0.000
Sb08g005140 Sorghum bicolor Sb08g005140 N 0.000
Sb02g020870 Sorghum bicolor Sb02g020870 N 0.000
Sb01g050320 Sorghum bicolor Sb01g050320 N 0.000
Pavir.J08903 Panicum virgatum Pavir.J08903 N 0.000