SNAPOd2T00017929001 (Oikopleura dioica)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 SNAPOd2T00017929001 T341264_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV

BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.778 0.665
TBX18
M11380_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.778 0.665
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN

NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.778 0.665
TBX15
M03554_2.00
Homo sapiens
AGGTGTGAAATTCACACCT

AGGTGTGAATTTCACACCT
SELEX
Jolma et al.(2013)
TBX15_1
0.768 0.665
TBX15
M03555_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX15_2
0.768 0.665
TBX15
M05795_2.00
Homo sapiens
NRSGTGTBAN

NTVACACSYN
SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX
0.768 0.665
TBX15
M11378_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_01
0.768 0.665
TBX15
M11379_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_02
0.768 0.665
TBX15
M05796_2.00
Homo sapiens
NDSGYGTBAN

NTVACRCSHN
SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX
0.768 0.665
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00017929001 T-box 248 455

Links

Other T-box family TFs
Other Oikopleura dioica TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL006447 Aedes aegypti AAEL006447 N 0.000
AALB001556 Anopheles albimanus AALB001556 N 0.000
AARA009507 Anopheles arabiensis AARA009507 N 0.000
AATE020693 Anopheles atroparvus AATE020693 N 0.000
ACEP24609 Atta cephalotes ACEP24609 N 0.000
ACHR005186 Anopheles christyi ACHR005186 N 0.000
ACUA027137 Anopheles culicifacies ACUA027137 N 0.000
ADAC009485 Anopheles darlingi ADAC009485 N 0.000
ADIR011417 Anopheles dirus ADIR011417 N 0.000
AEPI008140 Anopheles epiroticus AEPI008140 N 0.000
AFAF000495 Anopheles farauti AFAF000495 N 0.000
AFUN006547 Anopheles funestus AFUN006547 N 0.000
AGAP027996 Anopheles gambiae AGAP027996 N 0.000
AMAM003007 Anopheles maculatus AMAM003007 N 0.000
AMEC020300 Anopheles melas AMEC020300 N 0.000
AMEC021519 Anopheles melas AMEC021519 N 0.000
AMEM017542 Anopheles merus AMEM017542 N 0.000
AMIN009393 Anopheles minimus AMIN009393 N 0.000
AQUA011548 Anopheles quadriannulatus AQUA011548 N 0.000
ASIS010838 Anopheles sinensis ASIS010838 N 0.000
ASTEI01942 Anopheles stephensi ASTEI01942 N 0.000
Cflo_13558--XP_001120276.1_APIME Camponotus floridanus Cflo_13558--XP_001120276.1_APIME N 0.000
CPIJ004199 Culex quinquefasciatus CPIJ004199 N 0.000
CpipJ_CPIJ004199 Culex pipiens CpipJ_CPIJ004199 N 0.000
GB52687 Apis mellifera GB52687 N 0.000
HHAL000892-PA Halyomorpha halys HHAL000892-PA N 0.000
L798_02137 Zootermopsis nevadensis L798_02137 N 0.000
LDEC019364 Leptinotarsa decemlineata LDEC019364 N 0.000
MESCA006461 Megaselia scalaris MESCA006461 N 0.000
NV22789 Nasonia vitripennis NV22789 N 0.000
PHUM372700 Pediculus humanus PHUM372700 N 0.000
PPAI007743 Phlebotomus papatasi PPAI007743 N 0.000
RPRC014943 Rhodnius prolixus RPRC014943 N 0.000
SINV11247 Solenopsis invicta SINV11247 N 0.000
TC006488 Tribolium castaneum TC006488 N 0.000