tbx1.S (Xenopus laevis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 XB-GENE-6254396 T341289_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.918 0.995
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.918 0.995
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.918 0.995
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.918 0.995
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.918 0.995
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.918 0.995
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.918 0.995
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.918 0.995
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.918 0.995
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD

HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.741 0.731
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA

TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.741 0.731
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI70114 T-box 112 297
AAI70118 T-box 112 297
AAN77134 T-box 112 297

Links

Other T-box family TFs
Other Xenopus laevis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_02181 Capronia coronata A1O1_02181 I 0.000
A1O5_08472 Cladophialophora psammophila A1O5_08472 I 0.000
A1O7_08064 Cladophialophora yegresii A1O7_08064 I 0.000
A1O9_08153 Exophiala aquamarina A1O9_08153 I 0.000
AB05299.1 Alternaria brassicicola AB05299.1 I 0.000
ANIA_00928 Aspergillus nidulans CADANIAG00001727 D 0.000
AOL_s00097g406 Arthrobotrys oligospora AOL_s00097g406 I 0.000
ATEG_05199 Aspergillus terreus CADATEAG00005112 I 0.000
AUEXF2481DRAFT_6834 Aureobasidium subglaciale AUEXF2481DRAFT_6834 I 0.000
BAUCODRAFT_78015 Baudoinia compniacensis BAUCODRAFT_78015 I 0.000
BBA_00861 Beauveria bassiana BBA_00861 I 0.000
Bcin10g03530 Botrytis cinerea Bcin10g03530 I 0.000
CADAFLAG00001126 Aspergillus flavus CADAFLAG00001126 I 0.000
CADANGAG00001424 Aspergillus niger CADANGAG00001424 I 0.000
CCM_05638 Cordyceps militaris CCM_05638 I 0.000
CIMG_03081 Coccidioides immitis CIMG_03081 I 0.000
Cob_10342 Colletotrichum orbiculare Cob_10342 I 0.000
COCC4DRAFT_176529 Bipolaris maydis COCC4DRAFT_176529 I 0.000
COCCADRAFT_31801 Bipolaris zeicola COCCADRAFT_31801 I 0.000
COCMIDRAFT_84450 Bipolaris oryzae COCMIDRAFT_84450 I 0.000
COCSADRAFT_266185 Bipolaris sorokiniana COCSADRAFT_266185 I 0.000
COCVIDRAFT_14051 Bipolaris victoriae COCVIDRAFT_14051 I 0.000
CPC735_010610 Coccidioides posadasii CPC735_010610 I 0.000
CPUR_07356 Claviceps purpurea CPUR_07356 I 0.000
DOTSEDRAFT_69884 Dothistroma septosporum DOTSEDRAFT_69884 I 0.000
estExt_Genewise1Plus.C_140773 Mycosphaerella fijiensis estExt_Genewise1Plus.C_140773 I 0.000
estExt_Genewise1Plus.C_80383 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_80383 I 0.000
estExt_Genewise1Plus.C_chr_20926 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_20926 I 0.000
estExt_Genewise1Plus.C_sca_14_chr10_3_00150 Nectria haematococca estExt_Genewise1Plus.C_sca_14_chr10_3_00150 I 0.000
EURHEDRAFT_408126 Aspergillus ruber EURHEDRAFT_408126 I 0.000
EV44_g3230 Erysiphe necator EV44_g3230 I 0.000
F503_07473 Ophiostoma piceae uamh F503_07473 I 0.000
FFUJ_12164 Fusarium fujikuroi FFUJ_12164 I 0.000
fgenesh1_pm.00042_#_359 Aspergillus carbonarius fgenesh1_pm.00042_#_359 I 0.000
fgenesh2_pg.C_scaffold_1000308 Neurospora discreta fgenesh2_pg.C_scaffold_1000308 I 0.000
FGRRES_15897 Fusarium graminearum FGRRES_15897 I 0.000
FOXG_04283 Fusarium oxysporum FOXG_04283 I 0.000
FPSE_09978 Fusarium pseudograminearum FPSE_09978 I 0.000
FVEG_07406 Fusarium verticillioides FVEG_07406 I 0.000
G647_07030 Cladophialophora carrionii G647_07030 I 0.000
GGTG_10494 Gaeumannomyces graminis GGTG_10494 I 0.000
GLRG_01236 Colletotrichum graminicola GLRG_01236 I 0.000
GMDG_03846 Pseudogymnoascus destructans GMDG_03846 N 0.000
GSTUM_00002996001 Tuber melanosporum GSTUM_00002996001 I 0.000
H072_4801 Dactylellina haptotyla H072_4801 I 0.000
H101_06251 Trichophyton interdigitale H101_06251 I 0.000
H102_00463 Trichophyton rubrum H102_00463 I 0.000
HCBG_01324 Histoplasma capsulatum HCBG_01324 I 0.000
HMPREF1120_02532 Exophiala dermatitidis HMPREF1120_02532 I 0.000
HMPREF1624_00610 Sporothrix schenckii HMPREF1624_00610 I 0.000
LEMA_P088770.1 Leptosphaeria maculans LEMA_P088770.1 I 0.000
M437DRAFT_69925 Aureobasidium melanogenum M437DRAFT_69925 I 0.000
M438DRAFT_354976 Aureobasidium pullulans M438DRAFT_354976 I 0.000
MAJ_03096 Metarhizium majus MAJ_03096 I 0.000
MANI_006126 Metarhizium anisopliae MANI_006126 I 0.000
MAPG_09932 Magnaporthe poae MAPG_09932 I 0.000
MBM_00232 Marssonina brunnea MBM_00232 I 0.000
MBR_08762 Metarhizium brunneum MBR_08762 I 0.000
MCYG_00067 Microsporum canis MCYG_00067 I 0.000
MCYG_00067 Arthroderma otae MCYG_00067 I 0.000
MGU_09012 Metarhizium guizhouense MGU_09012 I 0.000
MGYG_07139 Microsporum gypseum MGYG_07139 I 0.000
MPH_10551 Macrophomina phaseolina MPH_10551 I 0.000
MYCFIDRAFT_210457 Pseudocercospora fijiensis MYCFIDRAFT_210457 I 0.000
Mycgr3G68239 Zymoseptoria tritici Mycgr3G68239 I 0.000
MYCTH_2302011 Myceliophthora thermophila MYCTH_2302011 I 0.000
NechaG72439 Fusarium solani NechaG72439 I 0.000
NEUTE1DRAFT_93932 Neurospora tetrasperma NEUTE1DRAFT_93932 I 0.000
PAAG_05307 Paracoccidioides sp lutzii PAAG_05307 I 0.000
PABG_06059 Paracoccidioides brasiliensis PABG_06059 I 0.000
Pc16g14610 Penicillium chrysogenum Pc16g14610 I 0.000
PCH_Pc16g14610 Penicillium rubens PCH_Pc16g14610 I 0.000
PDE_00510 Penicillium oxalicum PDE_00510 I 0.000
PDIP_65580 Penicillium digitatum PDIP_65580 I 0.000
PEX1_005990 Penicillium expansum PEX1_005990 I 0.000
PFICI_07802 Pestalotiopsis fici PFICI_07802 N 0.000
PITC_097670 Penicillium italicum PITC_097670 I 0.000
PTRG_10554 Pyrenophora triticirepentis PTRG_10554 I 0.000
PTT_02242 Pyrenophora teres PTT_02242 I 0.000
PV04_08584 Capronia semiimmersa PV04_08584 I 0.000
PV05_01128 Exophiala xenobiotica PV05_01128 I 0.000
PV07_01284 Cladophialophora immunda PV07_01284 I 0.000
PV09_08665 Verruconis gallopava PV09_08665 I 0.000
SAPIO_CDS0532 Scedosporium apiospermum SAPIO_CDS0532 I 0.000
SBOR_2018 Sclerotinia borealis SBOR_2018 I 0.000
SEPMUDRAFT_123488 Sphaerulina musiva SEPMUDRAFT_123488 I 0.000
SETTUDRAFT_32470 Setosphaeria turcica SETTUDRAFT_32470 I 0.000
SMAC_02549 Sordaria macrospora SMAC_02549 I 0.000
SNOG_02470 Phaeosphaeria nodorum SNOG_02470 I 0.000
SNOG_02470 Stagonospora nodorum SNOG_02470 I 0.000
SPBR_06805 Sporothrix brasiliensis SPBR_06805 I 0.000
SS1G_07003 Sclerotinia sclerotiorum SS1G_07003 I 0.000
tah-3 Neurospora crassa NCU03686 D 0.000
TESG_03220 Trichophyton tonsurans TESG_03220 I 0.000
THITE_2108176 Thielavia terrestris THITE_2108176 I 0.000
TRIATDRAFT_133633 Trichoderma atroviride TRIATDRAFT_133633 I 0.000
TRIREDRAFT_22925 Trichoderma reesei TRIREDRAFT_22925 I 0.000
TRIVIDRAFT_90960 Trichoderma virens TRIVIDRAFT_90960 I 0.000
U727_00430440431 Penicillium solitum U727_00430440431 I 0.000
UCRNP2_1469 Neofusicoccum parvum UCRNP2_1469 I 0.000
UREG_02875 Uncinocarpus reesii UREG_02875 I 0.000
UV8b_6280 Ustilaginoidea virens UV8b_6280 I 0.000
V499_08420 Pseudogymnoascus pannorum V499_08420 N 0.000
VHEMI02370 Torrubiella hemipterigena VHEMI02370 I 0.000
VHEMI02535 Torrubiella hemipterigena VHEMI02535 I 0.000
W97_01407 Coniosporium apollinis W97_01407 I 0.000
X797_003001 Metarhizium robertsii X797_003001 I 0.000