D915_09218 (Fasciola hepatica)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 D915_09218 T341644_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.824 0.802
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.824 0.802
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.824 0.802
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.824 0.802
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.824 0.802
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.824 0.802
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.824 0.802
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.824 0.802
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.824 0.802
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.824 0.802
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.824 0.802
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.824 0.802
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.824 0.802
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.824 0.802
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.824 0.797
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.824 0.797
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.824 0.797
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN

NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.764 0.687
TBX21
M03546_2.00
Homo sapiens
GGTGTGAHDTMACACY

RGTGTKAHDTCACACC
SELEX
Jolma et al.(2013)
TBX21_1
0.748 0.511
TBX21
M03547_2.00
Homo sapiens
DAGGTGTGAW

WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_2
0.748 0.511
TBX21
M03548_2.00
Homo sapiens
TMACACYTNNDAGGTGTGA

TCACACCTHNNARGTGTKA
SELEX
Jolma et al.(2013)
TBX21_3
0.748 0.511
TBX21
M03549_2.00
Homo sapiens
GGTGTGAWATCACACC

GGTGTGATWTCACACC
SELEX
Jolma et al.(2013)
TBX21_4
0.748 0.511
TBX21
M03550_2.00
Homo sapiens
DAGGTGTGAW

WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_5
0.748 0.511
TBX21
M03551_2.00
Homo sapiens
TSACACCWNMRAGGTGTGA

TCACACCTYKNWGGTGTSA
SELEX
Jolma et al.(2013)
TBX21_6
0.748 0.511
TBX21
M05793_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX
0.748 0.511
TBX21
M09425_2.00
Homo sapiens
NDSDRGSTGWBRN

NYVWCASCYHSHN
Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A
0.748 0.511
Tbx21
M09428_2.00
Mus musculus
DNDDSTGWSDND

HNHSWCASHHNH
Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A
0.748 0.511
Tbx21
M09648_2.00
Mus musculus
ADGTGWSAHN

NDTSWCACHT
Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802
0.748 0.511
TBX21
M05794_2.00
Homo sapiens
DASGTGTKAW

WTMACACSTH
SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX
0.748 0.511
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.747 0.648
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_09218 T-box 287 480

Links

Other T-box family TFs
Other Fasciola hepatica TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CPAG_01644 Candida parapsilosis CPAG_01644 N 0.000
HPODL_01547 Ogataea parapolymorpha HPODL_01547 N 0.000
JL09_g3061 Pichia kudriavzevii JL09_g3061 N 0.000
KAFR_0A01090 Kazachstania africana KAFR_0A01090 N 0.000
KUCA_T00001162001 Kuraishia capsulata KUCA_T00001162001 N 0.000
LELG_05572 Lodderomyces elongisporus LELG_05572 N 0.000
MELLADRAFT_105710 Melampsora laricipopulina MELLADRAFT_105710 N 0.000
PGUG_04174 Meyerozyma guilliermondii PGUG_04174 N 0.000
PICST_32504 Scheffersomyces stipitis PICST_32504 N 0.000
SPAPADRAFT_63801 Spathaspora passalidarum SPAPADRAFT_63801 N 0.000
YALI0_C12364g Yarrowia lipolytica YALI0_C12364g N 0.000
fgenesh1_pg.C_chr_5.1000668 Pichia stipitis fgenesh1_pg.C_chr_5.1000668 N 0.000
H072_5692 Dactylellina haptotyla H072_5692 N 0.000
GSTUM_00011420001 Tuber melanosporum GSTUM_00011420001 N 0.000
GNLVRS01_PISO0J09051g Millerozyma farinosa GNLVRS01_PISO0J09051g N 0.000
PGUG_04174 Candida guilliermondii PGUG_04174 N 0.000
AOL_s00006g96 Arthrobotrys oligospora AOL_s00006g96 N 0.000
BN7_3856 Wickerhamomyces ciferrii BN7_3856 N 0.000
CANTEDRAFT_113769 Candida tenuis CANTEDRAFT_113769 N 0.000
CORT_0H00800 Candida orthopsilosis CORT_0H00800 N 0.000
CTRG_04979 Candida tropicalis CTRG_04979 N 0.000
DEHA2F16258g Debaryomyces hansenii DEHA2F16258g N 0.000
DRE_02221 Drechslerella stenobrocha DRE_02221 N 0.000
E5Q_02905 Mixia osmundae E5Q_02905 N 0.000
G210_1949 Candida maltosa G210_1949 N 0.000
GNLVRS01_PISO0I07224g Millerozyma farinosa GNLVRS01_PISO0I07224g N 0.000
XP_002493183.1 Pichia pastoris XP_002493183.1 N 0.000