CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0002342901
(
Heligmosomoides bakeri
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
HPBE_0002342901
T341750_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002342901-mRNA-1
T-box
56
225
VELDDKELWNSFNSCGTEMVITKSGRRIFPAFRVKISGLDKKSKYIFLMDLVPADECRYKFNNSRWMVAGKADPEMPKRMYIHPDSPATGEHWMAKGANFHKLKLTNNISDKQGYTILNSMHKYQPRLHIVRCAEIMNLPYSTFRTFVFKETEFIAVTAYQNEKVCSLDN
Links
Other
T-box
family TFs
Other
Heligmosomoides bakeri
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0000536001
Ascaris lumbricoides
ALUE_0000536001
N
0.788
Aan_R014902
Calypte anna
Aan_R014902
I
0.782
ENSGMOG00000010377
Gadus morhua
ENSGMOG00000010377
N
0.762
TBX3
Felis catus
ENSFCAG00000024116
N
0.759
TBX3
Pteropus vampyrus
ENSPVAG00000008090
I
0.759
ENSMEUG00000013490
Macropus eugenii
ENSMEUG00000013490
N
0.759
HCOI00950300
Haemonchus contortus
HCOI00950300
I
0.740
TELCIR_02934
Teladorsagia circumcincta
TELCIR_02934
I
0.740
HPLM_0000823101
Haemonchus placei
HPLM_0000823101
I
0.740
DICVIV_03029
Dictyocaulus viviparus
DICVIV_03029
I
0.740
ACOC_0000095801
Angiostrongylus costaricensis
ACOC_0000095801
I
0.740
ACAC_0001257201
Angiostrongylus cantonensis
ACAC_0001257201
I
0.740
ANCCAN_17341
Ancylostoma caninum
ANCCAN_17341
I
0.738
ANCCEY_07585
Ancylostoma ceylanicum
ANCCEY_07585
I
0.738
ENSPSIG00000004533
Pelodiscus sinensis
ENSPSIG00000004533
N
0.736