L892_g3119 (Steinernema scapterisci)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 L892_g3119 T341782_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.754 0.680
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.752 0.724
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.752 0.724
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.752 0.724
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.752 0.724
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.752 0.724
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.752 0.724
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.752 0.724
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.752 0.724
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.750 0.729
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.750 0.729
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.750 0.729
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.750 0.729
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.750 0.729
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.742 0.597
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.742 0.597
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.742 0.597
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.742 0.597
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.742 0.597
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.742 0.597
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.742 0.597
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.742 0.597
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.742 0.597
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.738 0.718
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.738 0.713
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g3119.t1 T-box 268 448

Links

Other T-box family TFs
Other Steinernema scapterisci TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L596_g26549 Steinernema carpocapsae L596_g26549 I 0.920
L893_g17881 Steinernema glaseri L893_g17881 I 0.883
L889_g18009 Steinernema feltiae L889_g18009 I 0.880
L898_g10464 Steinernema monticolum L898_g10464 I 0.869
SPAL_0001704100 Strongyloides papillosus SPAL_0001704100 I 0.797
SSTP_0000270400 Strongyloides stercoralis SSTP_0000270400 I 0.797
SVE_1909900 Strongyloides venezuelensis SVE_1909900 I 0.797
CBN26017 Caenorhabditis brenneri CBN26017 I 0.794
CJA11793 Caenorhabditis japonica CJA11793 I 0.793
PTRK_0001005500 Parastrongyloides trichosuri PTRK_0001005500 I 0.788
CRE29327 Caenorhabditis remanei CRE29327 I 0.785
CBG21316 Caenorhabditis briggsae CBG21316 I 0.785
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.773
tetur33g01070 Tetranychus urticae tetur33g01070 I 0.772
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.771
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I 0.769
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I 0.768
tbx3a Takifugu rubripes ENSTRUG00000015097 I 0.768
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I 0.768
tbx3a Danio rerio ENSDARG00000002216 I 0.768
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I 0.768
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I 0.768
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I 0.768
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I 0.768
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I 0.768
tbx3a Oryzias latipes ENSORLG00000007316 I 0.768
GM12345 Drosophila sechellia FBgn0167282 I 0.763
GK15734 Drosophila willistoni FBgn0217737 I 0.763
GE16345 Drosophila yakuba FBgn0233875 I 0.763
bi Drosophila melanogaster FBgn0000179 I 0.763
GL14298 Drosophila persimilis FBgn0151903 I 0.763
bi Drosophila virilis FBgn0020983 I 0.763
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.763
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.763
WBGene00245873 Onchocerca volvulus WBGene00245873 I 0.763
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.762
TriadG59753 Trichoplax adhaerens TriadG59753 I 0.761
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.761
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.761
RSKR_0001075800 Rhabditophanes kr3021 RSKR_0001075800 I 0.761
SPU_023386 Strongylocentrotus purpuratus SPU_023386 I 0.761
NEMVEDRAFT_v1g102530 Nematostella vectensis NEMVEDRAFT_v1g102530 I 0.760
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.759
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.759
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.759
tbx2b Danio rerio ENSDARG00000006120 I 0.759
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.758
RSKR_0000042800 Rhabditophanes kr3021 RSKR_0000042800 I 0.755
AAEL018223 Aedes aegypti AAEL018223 I 0.754
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D 0.754
GB49684 Apis mellifera GB49684 I 0.754
Bm3498 Brugia malayi Bm3498 I 0.753
ASU_08095 Ascaris suum ASU_08095 I 0.753
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I 0.753
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.752
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.752
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.752
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.752
Tbx2 Mus musculus ENSMUSG00000000093 D 0.752
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.752
AAI57537 Xenopus tropicalis AAI57537 I 0.752
TBX2 Sus scrofa ENSSSCG00000027060 I 0.752
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.752
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.752
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.752
TBX2 Microcebus murinus ENSMICG00000016649 I 0.752
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.752
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.752
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.752
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.752
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.752
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.752
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.752
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.752
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.752
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.752
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.752
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.752
TBX2 Bos taurus ENSBTAG00000014278 I 0.752
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.752
TBX2 Homo sapiens ENSG00000121068 D 0.752
tbx2a Danio rerio ENSDARG00000018025 I 0.752
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.752
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.752
TBX3 Homo sapiens ENSG00000135111 D 0.750
TBX3 Sus scrofa ENSSSCG00000009865 I 0.750
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.750
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.750
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.750
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.750
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.750
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.750
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.750
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.750
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.750
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.750
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.750
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.750
TBX3 Canis familiaris ENSCAFG00000009216 I 0.750
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.750
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.750
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.750
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.750
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.750
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.750
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.750
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.750
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.750
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.750
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.750
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.750
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.750
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.750
Tbx3 Mus musculus ENSMUSG00000018604 D 0.750
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.750
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.750
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.750
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.750
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.750
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.750
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.750
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.750
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.750
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.750
TBX3 Bos taurus ENSBTAG00000021706 I 0.750
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.750
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.750
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.750
TBX3 Microcebus murinus ENSMICG00000010947 I 0.750
NECAME_13239 Necator americanus NECAME_13239 I 0.749
ANCCAN_17341 Ancylostoma caninum ANCCAN_17341 I 0.749
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.749
ANCCEY_07585 Ancylostoma ceylanicum ANCCEY_07585 I 0.749
DICVIV_03029 Dictyocaulus viviparus DICVIV_03029 I 0.747
ACAC_0001257201 Angiostrongylus cantonensis ACAC_0001257201 I 0.747
tbx5b Danio rerio ENSDARG00000092060 I 0.747
ACOC_0000095801 Angiostrongylus costaricensis ACOC_0000095801 I 0.747
tbx-2 Caenorhabditis elegans WBGene00006543 I 0.747
HCOI00950300 Haemonchus contortus HCOI00950300 I 0.747
TELCIR_02934 Teladorsagia circumcincta TELCIR_02934 I 0.747
HPLM_0000823101 Haemonchus placei HPLM_0000823101 I 0.747
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.745
T265_05725 Opisthorchis viverrini T265_05725 I 0.745
csin107221 Clonorchis sinensis csin107221 I 0.745
EmuJ_001171900 Echinococcus multilocularis EmuJ_001171900 I 0.744
Hba_14542 Heterorhabditis bacteriophora Hba_14542 I 0.743
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I 0.742
TBX5 Bos taurus ENSBTAG00000011384 I 0.742
ENSP00000384152 Macaca fascicularis ENSP00000384152 I 0.742
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.742
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I 0.742
SMU15033270 Schmidtea mediterranea SMU15033270 I 0.742
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I 0.742
tbx5 Xenopus tropicalis XB-GENE-486855 I 0.742
TBX5 Canis familiaris ENSCAFG00000009189 I 0.742
tbx5.L Xenopus laevis XB-GENE-865653 I 0.742
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I 0.742
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I 0.742
TBX5 Felis catus ENSFCAG00000005574 I 0.742
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I 0.742
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I 0.742
TBX5 Otolemur garnettii ENSOGAG00000016204 I 0.742
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I 0.742
TBX5 Cavia porcellus ENSCPOG00000014558 I 0.742
TBX5 Gorilla gorilla ENSGGOG00000013775 I 0.742
TBX5 Loxodonta africana ENSLAFG00000010125 I 0.742
Tbx5 Mus musculus ENSMUSG00000018263 D 0.742
TBX5 Macaca mulatta ENSMMUG00000016202 I 0.742
TBX5 Myotis lucifugus ENSMLUG00000016530 I 0.742
TBX5 Meleagris gallopavo ENSMGAG00000010075 I 0.742
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I 0.742
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I 0.742
TBX5 Gallus gallus ENSGALG00000008253 I 0.742
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I 0.742
TBX5 Sus scrofa ENSSSCG00000009867 I 0.742
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I 0.742
TBX5 Homo sapiens ENSG00000089225 D 0.742
TBX5 Tursiops truncatus ENSTTRG00000000980 I 0.742
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I 0.742
Tbx5 Rattus norvegicus ENSRNOG00000001399 I 0.742
TBX5 Equus caballus ENSECAG00000017114 I 0.742
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I 0.742
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I 0.742
TBX5 Pan troglodytes ENSPTRG00000005496 I 0.742
tbx2b Gasterosteus aculeatus ENSGACG00000020309 I 0.741
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I 0.741
Smp_145230 Schistosoma mansoni Smp_145230 I 0.741
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.739
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.739
ENSPFOG00000016001 Poecilia formosa ENSPFOG00000016001 I 0.739
tbx5 Oryzias latipes ENSORLG00000008185 I 0.739
tbx5b Gasterosteus aculeatus ENSGACG00000009550 I 0.739
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I 0.739
D918_00588 Trichuris suis D918_00588 I 0.739
TBX2 Oryzias latipes ENSORLG00000014792 I 0.738
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I 0.738
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.738
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.738
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.738
tbx5a Gasterosteus aculeatus ENSGACG00000016787 I 0.738
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I 0.738
tbx5a Danio rerio ENSDARG00000024894 I 0.738
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.738
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.738
tbx5a Oryzias latipes ENSORLG00000007339 I 0.738
tbx5a Takifugu rubripes ENSTRUG00000015054 I 0.738
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I 0.738
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.738
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.738
tbx5a Tetraodon nigroviridis ENSTNIG00000009036 I 0.738
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I 0.738
TBX5 Monodelphis domestica ENSMODG00000012045 I 0.737
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.737
CJA04111 Caenorhabditis japonica CJA04111 N 0.735
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I 0.735
TriadG30221 Trichoplax adhaerens TriadG30221 I 0.735
tbx2b Oryzias latipes ENSORLG00000010011 I 0.735
ENSAMXG00000007100 Astyanax mexicanus ENSAMXG00000007100 I 0.734
Smp_163240 Schistosoma mansoni Smp_163240 I 0.734