CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MCOS_0000012101
(
Mesocestoides corti
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
MCOS_0000012101
T341802_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.796
0.764
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.796
0.764
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.796
0.764
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.796
0.764
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.796
0.764
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.796
0.764
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.796
0.764
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.796
0.764
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.796
0.764
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.796
0.764
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.796
0.764
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.796
0.764
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.796
0.764
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.796
0.764
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.796
0.764
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.796
0.764
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.796
0.764
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.780
0.703
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.747
0.632
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.741
0.571
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.741
0.571
TBX21
M03546_2.00
Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC
SELEX
Jolma et al.(2013)
TBX21_1
0.736
0.516
TBX21
M03547_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_2
0.736
0.516
TBX21
M03548_2.00
Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA
SELEX
Jolma et al.(2013)
TBX21_3
0.736
0.516
TBX21
M03549_2.00
Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC
SELEX
Jolma et al.(2013)
TBX21_4
0.736
0.516
TBX21
M03550_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_5
0.736
0.516
TBX21
M03551_2.00
Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA
SELEX
Jolma et al.(2013)
TBX21_6
0.736
0.516
TBX21
M05793_2.00
Homo sapiens
DAGGTGTKAN
NTMACACCTH
SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX
0.736
0.516
TBX21
M09425_2.00
Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN
Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A
0.736
0.516
Tbx21
M09428_2.00
Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH
Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A
0.736
0.516
Tbx21
M09648_2.00
Mus musculus
ADGTGWSAHN
NDTSWCACHT
Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802
0.736
0.516
TBX21
M05794_2.00
Homo sapiens
DASGTGTKAW
WTMACACSTH
SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX
0.736
0.516
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCOS_0000012101-mRNA-1
T-box
65
260
CHLETQELWQKFNELGTEMIITKSGRRMFPVMRVSFTGLRPGHSYTVLMDIVPVDNKRYRYAYHRSSWLVAGKADPEGAEQQRRRRRCYLHPDSPFTGEQLLRQTVSFEKLKLTNNPLDKHGYIILNSMHKYQPRIHLVRRPRGAFSPDALSALPADEVKTFEFPETVFIAVTAYQNQLITKLKIDCNPFAKGFRD
Links
Other
T-box
family TFs
Other
Mesocestoides corti
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy