SMRZ_0000901601 (Schistosoma margrebowiei)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 SMRZ_0000901601 T341926_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.105 1.000
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.105 1.000
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.105 1.000
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.105 1.000
XP_008203914.1
M01029_2.00 		Nasonia vitripennis
AGGTGTBA
TVACACCT		 PBM
SebePedros et al.(2013)
pTH9336 		0.105 1.000
estExt_fgenesh2_pg.C_1570024
M01030_2.00 		Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN		 PBM
SebePedros et al.(2013)
pTH9244 		0.105 1.000
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.105 1.000
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.105 1.000
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.105 1.000
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.105 1.000
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.105 1.000
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.105 1.000
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.105 1.000
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.105 1.000
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.105 1.000
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.105 1.000
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.105 1.000
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMRZ_0000901601-mRNA-1 T-box 1 17

Links

Other T-box family TFs
Other Schistosoma margrebowiei TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOAG_18576 Loa loa LOAG_18576 N 0.920
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.920
WUBG_11141 Wuchereria bancrofti WUBG_11141 N 0.920
augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 N 0.920
NEMVEDRAFT_v1g200081 Nematostella vectensis NEMVEDRAFT_v1g200081 N 0.914
Brh_R013163 Buceros rhinoceros Brh_R013163 I 0.911
ENSTGUG00000013956 Taeniopygia guttata ENSTGUG00000013956 N 0.892
ENSDNOG00000008614 Dasypus novemcinctus ENSDNOG00000008614 N 0.892
Tal_R008745 Tyto alba Tal_R008745 N 0.884
ENSACAG00000001033 Anolis carolinensis ENSACAG00000001033 I 0.884
ENSTGUG00000007802 Taeniopygia guttata ENSTGUG00000007802 I 0.884
TCNE_0000641501 Toxocara canis TCNE_0000641501 N 0.864
nLs.2.1.2.g03986 Litomosoides sigmodontis nLs.2.1.2.g03986 N 0.864
nDi.2.2.2.g08784 Dirofilaria immitis nDi.2.2.2.g08784 N 0.864
BTMF_0001772901 Brugia timori BTMF_0001772901 N 0.864
nOo.2.0.1.g07550 Onchocerca ochengi nOo.2.0.1.g07550 N 0.864
ACEP16058 Atta cephalotes ACEP16058 N 0.858
ENSOARG00000011096 Ovis aries ENSOARG00000011096 N 0.850
Minc16694 Meloidogyne incognita Minc16694 N 0.849
TCLT_0000604201 Thelazia callipaeda TCLT_0000604201 N 0.823
DILT_0001799701 Diphyllobothrium latum DILT_0001799701 N 0.817
EEL_0001013401 Elaeophora elaphi EEL_0001013401 N 0.807
SROB_0001443501 Schistosoma rodhaini SROB_0001443501 N 0.807
Hsal_09270--XP_394607.3_APIME Harpegnathos saltator Hsal_09270--XP_394607.3_APIME N 0.779
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N 0.771
CJA31660 Caenorhabditis japonica CJA31660 N 0.760
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N 0.749
SINV17750 Solenopsis invicta SINV17750 I 0.659
AQUA010449 Anopheles quadriannulatus AQUA010449 N 0.659
AFUN001004 Anopheles funestus AFUN001004 N 0.659
ACHR009374 Anopheles christyi ACHR009374 N 0.659
AEPI004511 Anopheles epiroticus AEPI004511 N 0.659
L798_01365 Zootermopsis nevadensis L798_01365 N 0.659
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N 0.659
BGIBMGA012898 Bombyx mori BGIBMGA012898 N 0.659
KGM_15500 Danaus plexippus KGM_15500 N 0.659
HMEL004264 Heliconius melpomene HMEL004264 N 0.659
GF19461 Drosophila ananassae FBgn0096470 N 0.659
PPAI002123 Phlebotomus papatasi PPAI002123 N 0.659
AALB008493 Anopheles albimanus AALB008493 N 0.618
GG18707 Drosophila erecta FBgn0110916 N 0.618
GD16691 Drosophila simulans FBgn0188280 N 0.618
LDEC010813 Leptinotarsa decemlineata LDEC010813 N 0.618
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I 0.618
AGAP011712 Anopheles gambiae AGAP011712 N 0.618
ACEP18777 Atta cephalotes ACEP18777 N 0.618
ISCW019287 Ixodes scapularis ISCW019287 N 0.618
ASTEI10438 Anopheles stephensi ASTEI10438 N 0.618
YQE_10906 Dendroctonus ponderosae YQE_10906 N 0.618
AMEM014364 Anopheles merus AMEM014364 N 0.618
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.618
LCUP008640 Lucilia cuprina LCUP008640 N 0.615
ACUA028082 Anopheles culicifacies ACUA028082 N 0.615
AMIN008749 Anopheles minimus AMIN008749 N 0.589
MCINX008208 Melitaea cinxia MCINX008208 N 0.544
Cflo_07689--XP_001122560.1_APIME Camponotus floridanus Cflo_07689--XP_001122560.1_APIME N 0.544
ADIR000207 Anopheles dirus ADIR000207 N 0.530
CPIJ000721 Culex quinquefasciatus CPIJ000721 N 0.529
CpipJ_CPIJ000721 Culex pipiens CpipJ_CPIJ000721 N 0.529
AMEC005290 Anopheles melas AMEC005290 N 0.515
TC015796 Tribolium castaneum TC015796 N 0.515
AARA000520 Anopheles arabiensis AARA000520 N 0.515
Ocbimv22001571m.g Octopus bimaculoides Ocbimv22001571m.g N 0.514
AFAF007434 Anopheles farauti AFAF007434 N 0.509
ASIS020776 Anopheles sinensis ASIS020776 N 0.506
MDOA009236 Musca domestica MDOA009236 N 0.467
ISCW019280 Ixodes scapularis ISCW019280 N 0.431
ENSGMOG00000001960 Gadus morhua ENSGMOG00000001960 N 0.398
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.358
ENSMMUP00000012907 Macaca fascicularis ENSMMUP00000012907 I 0.336
TBX2 Callithrix jacchus ENSCJAG00000001256 I 0.336
ENSPSIG00000006299 Pelodiscus sinensis ENSPSIG00000006299 N 0.336
HelroG77782 Helobdella robusta HelroG77782 N 0.294
ENSBTAP00000018970-D1 Bos grunniens ENSBTAP00000018970-D1 N 0.263
ENSOARG00000016407 Ovis aries ENSOARG00000016407 N 0.263
TBX2 Felis catus ENSFCAG00000008993 N 0.263
PHUM322730 Pediculus humanus PHUM322730 N 0.263
ENSCSAG00000005940 Chlorocebus sabaeus ENSCSAG00000005940 I 0.230
ENSPPYG00000008798 Pongo abelii ENSPPYG00000008798 I 0.230
Tbx2 Rattus norvegicus ENSRNOG00000003517 I 0.230
TBX2 Oryctolagus cuniculus ENSOCUG00000023498 I 0.230
TBX2 Tetraodon nigroviridis ENSTNIG00000014395 I 0.119
Cmyd_10016207 Chelonia mydas Cmyd_10016207 I 0.119
GK15734 Drosophila willistoni FBgn0217737 I 0.105
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.105
T265_09372 Opisthorchis viverrini T265_09372 I 0.105
GB49684 Apis mellifera GB49684 I 0.105
HelroG63904 Helobdella robusta HelroG63904 I 0.105
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.105
LotgiG171118 Lottia gigantea LotgiG171118 I 0.105
D917_09589 Trichinella nativa D917_09589 I 0.105
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.105
csin107376 Clonorchis sinensis csin107376 I 0.105
D918_00588 Trichuris suis D918_00588 I 0.105
LotgiG117095 Lottia gigantea LotgiG117095 I 0.105
GE16345 Drosophila yakuba FBgn0233875 I 0.105
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.105
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I 0.105
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D 0.105
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.105
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.105
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.105
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.105
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.105
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.105
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.105
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.105
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.105
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.105
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.105
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.105
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D 0.105
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.105
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.105
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.105
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.105
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.105
Smp_163240 Schistosoma mansoni Smp_163240 I 0.105
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.105
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.105
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.105
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.105
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.105
TBX3 Homo sapiens ENSG00000135111 D 0.105
TBX2 Homo sapiens ENSG00000121068 D 0.105
TBX2 Equus caballus ENSECAG00000024480 I 0.105
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.105
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.105
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.105
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.105
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.105
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.105
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.105
TBX3 Microcebus murinus ENSMICG00000010947 I 0.105
TBX2 Microcebus murinus ENSMICG00000016649 I 0.105
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.105
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.105
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.105
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.105
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.105
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.105
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.105
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.105
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.105
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.105
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.105
EFV62265 Trichinella spiralis EFV62265 I 0.105
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.105
AAEL018223 Aedes aegypti AAEL018223 I 0.105
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.105
CGI_10005914 Crassostrea gigas CGI_10005914 I 0.105
CGI_10016325 Crassostrea gigas CGI_10016325 I 0.105
ENSAPLG00000010653 Anas platyrhynchos ENSAPLG00000010653 I 0.105
TBX2 Bos taurus ENSBTAG00000014278 I 0.105
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.105
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.105
tbx2b Danio rerio ENSDARG00000006120 I 0.105
tbx2a Danio rerio ENSDARG00000018025 I 0.105
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.105
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.105
TBX3 Bos taurus ENSBTAG00000021706 I 0.105
TBX3 Canis familiaris ENSCAFG00000009216 I 0.105
TBX2 Canis familiaris ENSCAFG00000017745 I 0.105
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.105
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.105
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.105
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.105
TBX3 Sus scrofa ENSSSCG00000009865 I 0.105
TBX2 Sus scrofa ENSSSCG00000027060 I 0.105
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.105
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.105
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.105
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.105
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.105
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.105
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.105
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.105
bi Drosophila melanogaster FBgn0000179 I 0.105
bi Drosophila virilis FBgn0020983 I 0.105
GH12075 Drosophila grimshawi FBgn0119554 I 0.105
GL14298 Drosophila persimilis FBgn0151903 I 0.105
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.105
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.105
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.105
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.105
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.105
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.105
TBX2 Oryzias latipes ENSORLG00000014792 I 0.105
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.105
Tbx2 Mus musculus ENSMUSG00000000093 D 0.105
Tbx3 Mus musculus ENSMUSG00000018604 D 0.105
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.105
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.105
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.105
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.105
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.105
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.105
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.105
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.105
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.105
ENSONIG00000011959 Oreochromis niloticus ENSONIG00000011959 I 0.105
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.105
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.105
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I 0.105
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.105
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.105
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.105
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.105
GM12345 Drosophila sechellia FBgn0167282 I 0.105