CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
(
Meloidogyne floridensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
T341942_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2-mRNA-1
T-box
1
82
MDIVPCDANRWKFHNSRWTVAGKADPELQKPLHIHPDSPATGEHWMAKGASFHRVKVTNNATNKAEFVRVKHNSDFSFLINS
Links
Other
T-box
family TFs
Other
Meloidogyne floridensis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
N
0.880
ANCCEY_10148
Ancylostoma ceylanicum
ANCCEY_10148
N
0.834
BGIBMGA012897
Bombyx mori
BGIBMGA012897
N
0.814
GPUH_0000570001
Gongylonema pulchrum
GPUH_0000570001
N
0.813
RPRC007267
Rhodnius prolixus
RPRC007267
N
0.811
ACEP21923
Atta cephalotes
ACEP21923
N
0.804
WUBG_18569
Wuchereria bancrofti
WUBG_18569
N
0.798
HelroG92844
Helobdella robusta
HelroG92844
N
0.779
SCUD_0002048801
Schistosoma curassoni
SCUD_0002048801
N
0.766
OESDEN_18274
Oesophagostomum dentatum
OESDEN_18274
N
0.765
SROB_0000780601
Schistosoma rodhaini
SROB_0000780601
N
0.762
Smp_101790
Schistosoma mansoni
Smp_101790
N
0.762
SVUK_0002073301
Strongylus vulgaris
SVUK_0002073301
N
0.756
ANCDUO_18602
Ancylostoma duodenale
ANCDUO_18602
N
0.755
SINV17864
Solenopsis invicta
SINV17864
N
0.750
BGLB006532
Biomphalaria glabrata
BGLB006532
N
0.750
ACEP18776
Atta cephalotes
ACEP18776
N
0.749
SMTD_0001831301
Schistosoma mattheei
SMTD_0001831301
N
0.743
GPUH_0000522701
Gongylonema pulchrum
GPUH_0000522701
N
0.741
TELCIR_16834
Teladorsagia circumcincta
TELCIR_16834
N
0.736
ENSOANG00000030458
Ornithorhynchus anatinus
ENSOANG00000030458
N
0.735