snap_masked-nMf.1.1.scaf23208-processed-gene-0.2 (Meloidogyne floridensis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 snap_masked-nMf.1.1.scaf23208-processed-gene-0.2 T341942_2.00 WormBase:ParaSite (2015-Oct-22)
NCBI Gene Info:
This gene encodes a member of the Smad family of signal transduction proteins. Smad proteins are phosphorylated and activated by transmembrane serine-threonine receptor kinases in response to transforming growth factor (TGF)-beta signaling. The product of this gene forms homomeric complexes and heteromeric complexes with other activated Smad proteins, which then accumulate in the nucleus and regulate the transcription of target genes. This protein binds to DNA and recognizes an 8-bp palindromic sequence (GTCTAGAC) called the Smad-binding element (SBE). The protein acts as a tumor suppressor and inhibits epithelial cell proliferation. It may also have an inhibitory effect on tumors by reducing angiogenesis and increasing blood vessel hyperpermeability. The encoded protein is a crucial component of the bone morphogenetic protein signaling pathway. The Smad proteins are subject to complex regulation by post-translational modifications. Mutations or deletions in this gene have been shown to result in pancreatic cancer, juvenile polyposis syndrome, and hereditary hemorrhagic telangiectasia syndrome. [provided by RefSeq, May 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2-mRNA-1 T-box 1 82

Links

Other T-box family TFs
Other Meloidogyne floridensis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0 N 0.880
ANCCEY_10148 Ancylostoma ceylanicum ANCCEY_10148 N 0.834
BGIBMGA012897 Bombyx mori BGIBMGA012897 N 0.814
GPUH_0000570001 Gongylonema pulchrum GPUH_0000570001 N 0.813
RPRC007267 Rhodnius prolixus RPRC007267 N 0.811
ACEP21923 Atta cephalotes ACEP21923 N 0.804
WUBG_18569 Wuchereria bancrofti WUBG_18569 N 0.798
HelroG92844 Helobdella robusta HelroG92844 N 0.779
SCUD_0002048801 Schistosoma curassoni SCUD_0002048801 N 0.766
OESDEN_18274 Oesophagostomum dentatum OESDEN_18274 N 0.765
SROB_0000780601 Schistosoma rodhaini SROB_0000780601 N 0.762
Smp_101790 Schistosoma mansoni Smp_101790 N 0.762
SVUK_0002073301 Strongylus vulgaris SVUK_0002073301 N 0.756
ANCDUO_18602 Ancylostoma duodenale ANCDUO_18602 N 0.755
SINV17864 Solenopsis invicta SINV17864 N 0.750
BGLB006532 Biomphalaria glabrata BGLB006532 N 0.750
ACEP18776 Atta cephalotes ACEP18776 N 0.749
SMTD_0001831301 Schistosoma mattheei SMTD_0001831301 N 0.743
GPUH_0000522701 Gongylonema pulchrum GPUH_0000522701 N 0.741
TELCIR_16834 Teladorsagia circumcincta TELCIR_16834 N 0.736
ENSOANG00000030458 Ornithorhynchus anatinus ENSOANG00000030458 N 0.735