TMUE_s0080002600 (Trichuris muris)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 TMUE_s0080002600 T342026_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN

NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.788 0.692
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.783 0.747
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.783 0.747
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.783 0.747
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.783 0.747
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.783 0.747
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.783 0.747
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.783 0.747
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.783 0.747
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.783 0.747
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.783 0.747
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.783 0.747
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.783 0.747
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.783 0.747
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.783 0.747
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.783 0.747
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.783 0.747
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.783 0.747
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV

BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.740 0.615
TBX18
M11380_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.740 0.615
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN

NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.740 0.615
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0080002600 T-box 156 344

Links

Other T-box family TFs
Other Trichuris muris TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013127 Ailuropoda melanoleuca ENSAMEG00000013127 I 0.000
Alligator_sinensis_CCG020425.1 Alligator sinensis Alligator_sinensis_CCG020425.1 I 0.000
ENSAPLG00000010568 Anas platyrhynchos ENSAPLG00000010568 I 0.000
FOXP4 Anolis carolinensis ENSACAG00000002366 I 0.000
AATE017735 Anopheles atroparvus AATE017735 I 0.000
GB40150 Apis mellifera GB40150 I 0.000
Afo_R002065 Aptenodytes forsteri Afo_R002065 I 0.000
ENSAMXG00000000184 Astyanax mexicanus ENSAMXG00000000184 I 0.000
ENSAMXG00000007635 Astyanax mexicanus ENSAMXG00000007635 N 0.000
ENSAMXG00000017401 Astyanax mexicanus ENSAMXG00000017401 I 0.000
ENSAMXG00000007304 Astyanax mexicanus ENSAMXG00000007304 I 0.000
ACEP24841 Atta cephalotes ACEP24841 I 0.000
BGIBMGA004582 Bombyx mori BGIBMGA004582 I 0.000
ENSP00000309823-D1 Bos grunniens ENSP00000309823-D1 I 0.000
FOXP4 Bos taurus ENSBTAG00000014211 I 0.000
CBG19911 Caenorhabditis briggsae CBG19911 I 0.000
FOXP4 Callithrix jacchus ENSCJAG00000004180 I 0.000
Aan_R003795 Calypte anna Aan_R003795 I 0.000
Cflo_04844--XP_391970.3_APIME Camponotus floridanus Cflo_04844--XP_391970.3_APIME I 0.000
FOXP4 Canis familiaris ENSCAFG00000001596 I 0.000
CapteG173180 Capitella teleta CapteG173180 I 0.000
FOXP4 Cavia porcellus ENSCPOG00000022669 I 0.000
Cmyd_10002039 Chelonia mydas Cmyd_10002039 I 0.000
ENSCSAG00000011262 Chlorocebus sabaeus ENSCSAG00000011262 I 0.000
KGM_13946 Danaus plexippus KGM_13946 I 0.000
foxp3b Danio rerio ENSDARG00000078279 N 0.000
foxp4 Danio rerio ENSDARG00000076120 I 0.000
FOXP4 Dasypus novemcinctus ENSDNOG00000048023 I 0.000
GH19587 Drosophila grimshawi FBgn0127051 I 0.000
FoxP Drosophila melanogaster FBgn0262477 D 0.000
GJ23621 Drosophila virilis FBgn0210718 I 0.000
GK13409 Drosophila willistoni FBgn0215418 I 0.000
FOXP4 Equus caballus ENSECAG00000000572 I 0.000
FOXP4 Felis catus ENSFCAG00000011519 I 0.000
ENSFALG00000003032 Ficedula albicollis ENSFALG00000003032 I 0.000
ENSGMOG00000016520 Gadus morhua ENSGMOG00000016520 I 0.000
ENSGALG00000003375 Gallus gallus ENSGALG00000003375 I 0.000
foxp4 Gasterosteus aculeatus ENSGACG00000000367 I 0.000
Gfo_R002982 Geospiza fortis Gfo_R002982 I 0.000
FOXP4 Gorilla gorilla ENSGGOG00000016376 I 0.000
HHAL002628-PA Halyomorpha halys HHAL002628-PA I 0.000
Hsal_09811--XP_391970.3_APIME Harpegnathos saltator Hsal_09811--XP_391970.3_APIME I 0.000
HMEL004589 Heliconius melpomene HMEL004589 I 0.000
FOXP4 Homo sapiens ENSG00000137166 I 0.000
ENSSTOG00000014398 Ictidomys tridecemlineatus ENSSTOG00000014398 I 0.000
ENSLACG00000010141 Latimeria chalumnae ENSLACG00000010141 I 0.000
ENSLOCG00000012157 Lepisosteus oculatus ENSLOCG00000012157 I 0.000
LotgiG54435 Lottia gigantea LotgiG54435 I 0.000
FOXP4 Loxodonta africana ENSLAFG00000022762 I 0.000
ENSP00000309823 Macaca fascicularis ENSP00000309823 I 0.000
FOXP4 Macaca mulatta ENSMMUG00000019985 I 0.000
ENSMICG00000014572 Microcebus murinus ENSMICG00000014572 I 0.000
ENSMPUG00000013602 Mustela putorius furo ENSMPUG00000013602 I 0.000
Foxp4 Mus musculus ENSMUSG00000023991 I 0.000
Myotis_brandtii_FOXP4_10015407 Myotis brandtii Myotis_brandtii_FOXP4_10015407 I 0.000
NV18361 Nasonia vitripennis NV18361 I 0.000
ENSNLEG00000004944 Nomascus leucogenys ENSNLEG00000004944 I 0.000
FOXP4 Ochotona princeps ENSOPRG00000006763 I 0.000
Ogr06905 Ophisaurus gracilis Ogr06905 I 0.000
ENSONIG00000019299 Oreochromis niloticus ENSONIG00000019299 I 0.000
ENSONIG00000016969 Oreochromis niloticus ENSONIG00000016969 I 0.000
foxp4 Oryzias latipes ENSORLG00000015849 I 0.000
FOXP4 Otolemur garnettii ENSOGAG00000010113 I 0.000
ENSOARG00000002055 Ovis aries ENSOARG00000002055 I 0.000
FOXP4 Pan troglodytes ENSPTRG00000018155 I 0.000
ENSPANG00000018703 Papio anubis ENSPANG00000018703 I 0.000
ENSPSIG00000011832 Pelodiscus sinensis ENSPSIG00000011832 I 0.000
ENSPMAG00000005535 Petromyzon marinus ENSPMAG00000005535 I 0.000
ENSPFOG00000016968 Poecilia formosa ENSPFOG00000016968 I 0.000
Pvit_06042 Pogona vitticeps Pvit_06042 I 0.000
ENSPPYG00000016596 Pongo abelii ENSPPYG00000016596 I 0.000
FOXP4 Procavia capensis ENSPCAG00000004821 I 0.000
Foxp4 Rattus norvegicus ENSRNOG00000022804 I 0.000
Sakowv30031469m.g Saccoglossus kowalevskii Sakowv30031469m.g I 0.000
ENSSHAG00000007340 Sarcophilus harrisii ENSSHAG00000007340 I 0.000
sep1 Schizosaccharomyces pombe SPBC4C3.12 I 0.000
SPU_009876 Strongylocentrotus purpuratus SPU_009876 I 0.000
FOXP4 Sus scrofa ENSSSCG00000001619 I 0.000
FOXP4 Taeniopygia guttata ENSTGUG00000001837 I 0.000
foxp4 Takifugu rubripes ENSTRUG00000000892 I 0.000
ENSTNIG00000004837 Tetraodon nigroviridis ENSTNIG00000004837 I 0.000
foxp4 Tetraodon nigroviridis ENSTNIG00000007283 I 0.000
ENSTNIG00000008468 Tetraodon nigroviridis ENSTNIG00000008468 I 0.000
TC010836 Tribolium castaneum TC010836 I 0.000
FOXP4 Tursiops truncatus ENSTTRG00000016383 I 0.000
foxp4.S Xenopus laevis XB-GENE-982697 I 0.000
foxp4 Xenopus tropicalis XB-GENE-982692 I 0.000
ENSXMAG00000003824 Xiphophorus maculatus ENSXMAG00000003824 I 0.000
ENSXMAG00000012880 Xiphophorus maculatus ENSXMAG00000012880 I 0.000
L798_02862 Zootermopsis nevadensis L798_02862 I 0.000