CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo5g121420
(
Brassica oleracea
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
Bo5g121420
T342155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g121420.1
TBP
23
95
VPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGRMVCTGAKTEDSSKRTL
Links
Other
TBP
family TFs
Other
Brassica oleracea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPBR_07806
Sporothrix brasiliensis
SPBR_07806
N
0.909
TBP
Homo sapiens
ENSG00000112592
D
0.894
Gorai.007G288000
Gossypium raimondii
Gorai.007G288000
I
0.890
ENSAMEG00000010603
Ailuropoda melanoleuca
ENSAMEG00000010603
N
0.875
ENSACAG00000000993
Anolis carolinensis
ENSACAG00000000993
N
0.862
augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0
N
0.841
GRMZM2G161418
Zea mays
GRMZM2G161418
I
0.813
AMEC012048
Anopheles melas
AMEC012048
N
0.808
AMTR_s00047p00130260
Amborella trichopoda
AMTR_s00047p00130260
N
0.806
cassava28055.m1
Manihot esculenta
cassava28055.m1
N
0.800
CLEC006116
Cimex lectularius
CLEC006116
N
0.795
fgenesh2_pg.scaffold_68000071
Branchiostoma floridae
fgenesh2_pg.scaffold_68000071
N
0.770
MCYG_00725
Microsporum canis
MCYG_00725
N
0.769
PXEA_0001663701
Protopolystoma xenopodis
PXEA_0001663701
N
0.753
SBAD_0001092401
Soboliphyme baturini
SBAD_0001092401
N
0.711