EFV53163 (Trichinella spiralis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 EFV53163 T342249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.856 0.856
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.856 0.856
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.856 0.856
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.856 0.856
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.856 0.856
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.856 0.856
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.856 0.856
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.856 0.856
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.856 0.856
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.856 0.856
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.749 0.749
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.749 0.749
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.749 0.749
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV53163 TBP 84 166
EFV53163 TBP 174 257

Links

Other TBP family TFs
Other Trichinella spiralis TFs

766 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZBTB11 Homo sapiens ENSG00000066422 D 0.000
ENSAMEG00000003761 Ailuropoda melanoleuca ENSAMEG00000003761 I 0.000
ENSOARG00000018474 Ovis aries ENSOARG00000018474 I 0.000
ZBTB11 Oryctolagus cuniculus ENSOCUG00000017649 I 0.000
ENSPANG00000021636 Papio anubis ENSPANG00000021636 I 0.000
ENSPPYG00000013589 Pongo abelii ENSPPYG00000013589 I 0.000
ZBTB11 Pan troglodytes ENSPTRG00000015174 I 0.000
Zbtb11 Rattus norvegicus ENSRNOG00000001613 I 0.000
ENSSHAG00000008340 Sarcophilus harrisii ENSSHAG00000008340 I 0.000
ZBTB11 Sus scrofa ENSSSCG00000011953 I 0.000
ZBTB11 Taeniopygia guttata ENSTGUG00000013619 I 0.000
ZBTB11 Tursiops truncatus ENSTTRG00000002849 I 0.000
Afo_R013142 Aptenodytes forsteri Afo_R013142 I 0.000
ENSBTAP00000017903-D1 Bos grunniens ENSBTAP00000017903-D1 I 0.000
ENSP00000326200 Macaca fascicularis ENSP00000326200 I 0.000
Gfo_R002581 Geospiza fortis Gfo_R002581 I 0.000
ZBTB11 Ornithorhynchus anatinus ENSOANG00000007506 I 0.000
ENSNLEG00000003243 Nomascus leucogenys ENSNLEG00000003243 I 0.000
ZBTB11 Bos taurus ENSBTAG00000013460 I 0.000
ZBTB11 Canis familiaris ENSCAFG00000009599 I 0.000
ZBTB11 Callithrix jacchus ENSCJAG00000000499 I 0.000
ZBTB11 Cavia porcellus ENSCPOG00000000510 I 0.000
ENSCSAG00000006253 Chlorocebus sabaeus ENSCSAG00000006253 I 0.000
ZBTB11 Dasypus novemcinctus ENSDNOG00000035669 I 0.000
ZBTB11 Equus caballus ENSECAG00000024373 I 0.000
ENSFALG00000006526 Ficedula albicollis ENSFALG00000006526 I 0.000
ZBTB11 Felis catus ENSFCAG00000014254 I 0.000
ZBTB11 Gorilla gorilla ENSGGOG00000011023 I 0.000
ZBTB11 Macaca mulatta ENSMMUG00000015060 I 0.000
ZBTB11 Monodelphis domestica ENSMODG00000001927 I 0.000
ENSMPUG00000011727 Mustela putorius furo ENSMPUG00000011727 I 0.000
Zbtb11 Mus musculus ENSMUSG00000022601 I 0.000
Ogr07122 Ophisaurus gracilis Ogr07122 I 0.000