EFV53163 (Trichinella spiralis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 EFV53163 T342249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.856 0.856
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.856 0.856
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.856 0.856
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.856 0.856
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.856 0.856
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.856 0.856
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.856 0.856
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.856 0.856
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.856 0.856
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.856 0.856
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.749 0.749
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.749 0.749
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.749 0.749
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV53163 TBP 84 166
EFV53163 TBP 174 257

Links

Other TBP family TFs
Other Trichinella spiralis TFs

766 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSBTAG00000002113 Bos taurus ENSBTAG00000002113 N 0.000
ENSCAFG00000015031 Canis familiaris ENSCAFG00000015031 I 0.000
ENSCJAG00000012415 Callithrix jacchus ENSCJAG00000012415 I 0.000
ENSCSAG00000013630 Chlorocebus sabaeus ENSCSAG00000013630 I 0.000
ENSDNOG00000040988 Dasypus novemcinctus ENSDNOG00000040988 I 0.000
ENSFCAG00000012244 Felis catus ENSFCAG00000012244 N 0.000
ENSGGOG00000012848 Gorilla gorilla ENSGGOG00000012848 I 0.000
ENSMICG00000008558 Microcebus murinus ENSMICG00000008558 I 0.000
ENSMLUG00000010765 Myotis lucifugus ENSMLUG00000010765 I 0.000
ENSMMUG00000010404 Macaca mulatta ENSMMUG00000010404 I 0.000
ENSMPUG00000013342 Mustela putorius furo ENSMPUG00000013342 I 0.000
ENSNLEG00000003328 Nomascus leucogenys ENSNLEG00000003328 I 0.000
ENSOARG00000013304 Ovis aries ENSOARG00000013304 I 0.000
ENSOGAG00000005514 Otolemur garnettii ENSOGAG00000005514 I 0.000
ENSP00000380243 Macaca fascicularis ENSP00000380243 I 0.000
ENSP00000383643-D14 Bos grunniens ENSP00000383643-D14 N 0.000
ENSPPYG00000020293 Pongo abelii ENSPPYG00000020293 I 0.000
ENSTBEG00000004010 Tupaia belangeri ENSTBEG00000004010 I 0.000
ENSTSYG00000000220 Tarsius syrichta ENSTSYG00000000220 I 0.000
ENSTTRG00000006804 Tursiops truncatus ENSTTRG00000006804 I 0.000
ENSVPAG00000001511 Vicugna pacos ENSVPAG00000001511 I 0.000
Myotis_brandtii_ZNF41_10006078 Myotis brandtii Myotis_brandtii_ZNF41_10006078 I 0.000
ZNF41 Pan troglodytes ENSPTRG00000021843 I 0.000
ZNF41 Oryctolagus cuniculus ENSOCUG00000029242 I 0.000
ZNF41 Homo sapiens ENSG00000147124 D 0.000