ENSPFOG00000001118 (Poecilia formosa)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSPFOG00000001118 T342398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.902 0.902
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.902 0.902
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.902 0.902
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.902 0.902
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.902 0.902
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.902 0.902
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.902 0.902
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.902 0.902
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.902 0.902
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.902 0.902
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.740 0.740
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.740 0.740
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000001063 TBP 150 232
ENSPFOP00000001063 TBP 240 279

Links

Other TBP family TFs
Other Poecilia formosa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSSARG00000002128 Sorex araneus ENSSARG00000002128 I 0.947
ENSCSAG00000011839 Chlorocebus sabaeus ENSCSAG00000011839 I 0.947
Tbp Mus musculus ENSMUSG00000014767 D 0.943
TBPL2 Gorilla gorilla ENSGGOG00000001055 I 0.894
ENSLOCG00000011741 Lepisosteus oculatus ENSLOCG00000011741 I 0.854
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.846
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.837
Sjc_0110260 Schistosoma japonicum Sjc_0110260 I 0.833
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.832
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.809
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.803
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.803
ENSPCAG00000002842 Procavia capensis ENSPCAG00000002842 I 0.798
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I 0.798
SPER_0003100001 Spirometra erinaceieuropaei SPER_0003100001 I 0.788
TBPL2 Tupaia belangeri ENSTBEG00000003892 I 0.784
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.769
TBP Vicugna pacos ENSVPAG00000006523 I 0.764
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.756
ENSFALG00000003735 Ficedula albicollis ENSFALG00000003735 I 0.753
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.752
maker-nMf.1.1.scaf22650-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf22650-augustus-gene-0.3 I 0.752
TBPL2 Erinaceus europaeus ENSEEUG00000008616 I 0.752
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.752
K437DRAFT_258899 Tilletiaria anomala K437DRAFT_258899 I 0.748
Alligator_sinensis_CCG004402.1 Alligator sinensis Alligator_sinensis_CCG004402.1 I 0.748
Si023295m.g Setaria italica Si023295m.g I 0.740
ATG14 Dasypus novemcinctus ENSDNOG00000015108 I 0.737
Myotis_brandtii_TBPL2_10011178 Myotis brandtii Myotis_brandtii_TBPL2_10011178 I 0.735
Aan_R001616 Calypte anna Aan_R001616 I 0.734
ENSMEUG00000014455 Macropus eugenii ENSMEUG00000014455 I 0.724
ENSBTAG00000046809 Bos taurus ENSBTAG00000046809 I 0.723
ENSOANG00000022637 Ornithorhynchus anatinus ENSOANG00000022637 I 0.713
BGLB001531 Biomphalaria glabrata BGLB001531 I 0.707
ANCCAN_21534 Ancylostoma caninum ANCCAN_21534 I 0.706
OFLC_0000347601 Onchocerca flexuosa OFLC_0000347601 I 0.701
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I 0.701
trf3 Takifugu rubripes ENSTRUG00000009283 I 0.701
estExt_fgenesh2_pg.C_680056 Branchiostoma floridae estExt_fgenesh2_pg.C_680056 I 0.701