GSTUM_00003160001 (Tuber melanosporum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 GSTUM_00003160001 T342594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.910 0.910
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.910 0.910
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.910 0.910
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.826 0.826
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.826 0.826
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.826 0.826
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.826 0.826
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.826 0.826
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.826 0.826
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.826 0.826
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.826 0.826
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.826 0.826
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.826 0.826
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAZ81056 TBP 77 159
CAZ81056 TBP 167 250

Links

Other TBP family TFs
Other Tuber melanosporum TFs

762 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011824 Calypte anna Aan_R011824 I 0.000
Afo_R002575 Aptenodytes forsteri Afo_R002575 I 0.000
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I 0.000
Brh_R009664 Buceros rhinoceros Brh_R009664 I 0.000
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I 0.000
NFKB2 Anolis carolinensis ENSACAG00000014215 I 0.000
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I 0.000
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I 0.000
NFKB2 Bos taurus ENSBTAG00000006017 I 0.000
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I 0.000
NFKB2 Canis familiaris ENSCAFG00000010155 I 0.000
NFKB2 Callithrix jacchus ENSCJAG00000017928 I 0.000
NFKB2 Cavia porcellus ENSCPOG00000004847 I 0.000
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I 0.000
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I 0.000
Nfkb2 Dipodomys ordii ENSDORG00000013409 I 0.000
NFKB2 Equus caballus ENSECAG00000019593 I 0.000
NFKB2 Echinops telfairi ENSETEG00000002347 I 0.000
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I 0.000
NFKB2 Felis catus ENSFCAG00000001242 I 0.000
NFKB2 Homo sapiens ENSG00000077150 D 0.000
NFKB2 Gallus gallus ENSGALG00000005653 I 0.000
NFKB2 Gorilla gorilla ENSGGOG00000006971 I 0.000
NFKB2 Loxodonta africana ENSLAFG00000006805 I 0.000
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I 0.000
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I 0.000
NFKB2 Microcebus murinus ENSMICG00000011856 I 0.000
NFKB2 Myotis lucifugus ENSMLUG00000006287 I 0.000
NFKB2 Macaca mulatta ENSMMUG00000002990 I 0.000
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I 0.000
Nfkb2 Mus musculus ENSMUSG00000025225 D 0.000
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.000
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I 0.000
ENSOANG00000006254 Ornithorhynchus anatinus ENSOANG00000006254 I 0.000
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.000
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I 0.000
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I 0.000
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I 0.000
NFKB2 Otolemur garnettii ENSOGAG00000016379 I 0.000
NFKB2 Ochotona princeps ENSOPRG00000006569 I 0.000
ENSP00000189444 Macaca fascicularis ENSP00000189444 I 0.000
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I 0.000
NFKB2 Procavia capensis ENSPCAG00000011503 I 0.000
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I 0.000
NFKB2 Pan troglodytes ENSPTRG00000002888 I 0.000
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I 0.000
NFKB2 Sorex araneus ENSSARG00000006180 I 0.000
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I 0.000
NFKB2 Sus scrofa ENSSSCG00000010580 I 0.000
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.000
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I 0.000
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I 0.000
NFKB2 Tursiops truncatus ENSTTRG00000008357 I 0.000
Gfo_R002459 Geospiza fortis Gfo_R002459 I 0.000
Ogr18048 Ophisaurus gracilis Ogr18048 I 0.000
Pvit_13855 Pogona vitticeps Pvit_13855 I 0.000
nfkb2 Xenopus tropicalis XB-GENE-970084 I 0.000