LOAG_01904 (Loa loa)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 LOAG_01904 T342667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.844 0.844
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.844 0.844
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.844 0.844
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.844 0.844
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.844 0.844
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.844 0.844
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.844 0.844
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.844 0.844
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.844 0.844
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.844 0.844
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.743 0.743
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.743 0.743
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFO26582.1 TBP 194 276
EFO26582.1 TBP 284 367

Links

Other TBP family TFs
Other Loa loa TFs

733 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bm9299 Brugia malayi Bm9299 N 0.000
L596_g26851 Steinernema carpocapsae L596_g26851 N 0.000
L889_g13736 Steinernema feltiae L889_g13736 N 0.000
L892_g15981 Steinernema scapterisci L892_g15981 N 0.000
L893_g3205 Steinernema glaseri L893_g3205 N 0.000
L898_g24307 Steinernema monticolum L898_g24307 N 0.000
nAv.1.0.1.g09990 Acanthocheilonema viteae nAv.1.0.1.g09990 N 0.000
NBR_0000089501 Nippostrongylus brasiliensis NBR_0000089501 N 0.000
nDi.2.2.2.g04918 Dirofilaria immitis nDi.2.2.2.g04918 N 0.000
NECAME_00195 Necator americanus NECAME_00195 N 0.000
nLs.2.1.2.g05791 Litomosoides sigmodontis nLs.2.1.2.g05791 N 0.000
OESDEN_17196 Oesophagostomum dentatum OESDEN_17196 N 0.000
SMUV_0000860001 Syphacia muris SMUV_0000860001 N 0.000
TCLT_0000665401 Thelazia callipaeda TCLT_0000665401 N 0.000
TELCIR_08516 Teladorsagia circumcincta TELCIR_08516 N 0.000
HPLM_0001243201 Haemonchus placei HPLM_0001243201 N 0.000
HPBE_0000922401 Heligmosomoides bakeri HPBE_0000922401 N 0.000
CBG12575 Caenorhabditis briggsae CBG12575 N 0.000
CBN10485 Caenorhabditis brenneri CBN10485 N 0.000
CJA15011 Caenorhabditis japonica CJA15011 N 0.000
CRE29654 Caenorhabditis remanei CRE29654 N 0.000
LOAG_03829 Loa loa LOAG_03829 N 0.000
cebp-2 Caenorhabditis elegans WBGene00016754 N 0.000
WBGene00238092 Onchocerca volvulus WBGene00238092 N 0.000
ALUE_0000443201 Ascaris lumbricoides ALUE_0000443201 N 0.000
ANCDUO_23123 Ancylostoma duodenale ANCDUO_23123 N 0.000
ASU_09498 Ascaris suum ASU_09498 N 0.000
BTMF_0001646101 Brugia timori BTMF_0001646101 N 0.000
EEL_0000031301 Elaeophora elaphi EEL_0000031301 N 0.000
Hba_08585 Heterorhabditis bacteriophora Hba_08585 N 0.000
HCOI00796700 Haemonchus contortus HCOI00796700 N 0.000
TELCIR_23227 Teladorsagia circumcincta TELCIR_23227 N 0.000