M408DRAFT_329006 (Serendipita vermifera)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 M408DRAFT_329006 T342675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.882 0.882
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.882 0.882
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.882 0.882
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.787 0.787
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.787 0.787
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.787 0.787
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.787 0.787
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.787 0.787
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.787 0.787
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.787 0.787
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.787 0.787
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.787 0.787
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.787 0.787
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM28955 TBP 1 43
KIM28955 TBP 51 134

Links

Other TBP family TFs
Other Serendipita vermifera TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N 0.000
SINV24013 Solenopsis invicta SINV24013 N 0.000
YQE_11876 Dendroctonus ponderosae YQE_11876 N 0.000
Afo_R008528 Aptenodytes forsteri Afo_R008528 N 0.000
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N 0.000
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N 0.000
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N 0.000
CLEC001936 Cimex lectularius CLEC001936 N 0.000
HHAL005214-PA Halyomorpha halys HHAL005214-PA N 0.000
LDEC003623 Leptinotarsa decemlineata LDEC003623 N 0.000
cers3.L Xenopus laevis XB-GENE-6251639 N 0.000
AARA002212 Anopheles arabiensis AARA002212 N 0.000
AATE002410 Anopheles atroparvus AATE002410 N 0.000
ACHR009221 Anopheles christyi ACHR009221 N 0.000
AEPI009380 Anopheles epiroticus AEPI009380 N 0.000
AFAF012002 Anopheles farauti AFAF012002 N 0.000
AMEC017514 Anopheles melas AMEC017514 N 0.000
AMEM008456 Anopheles merus AMEM008456 N 0.000
SINV20227 Solenopsis invicta SINV20227 N 0.000
RPRC008736 Rhodnius prolixus RPRC008736 N 0.000
AAEL009092 Aedes aegypti AAEL009092 N 0.000
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N 0.000
ADAC010420 Anopheles darlingi ADAC010420 N 0.000
AGAP001761 Anopheles gambiae AGAP001761 N 0.000
CPIJ012963 Culex quinquefasciatus CPIJ012963 N 0.000
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N 0.000
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N 0.000
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N 0.000
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N 0.000
CERS5 Takifugu rubripes ENSTRUG00000010435 N 0.000
HelroG82517 Helobdella robusta HelroG82517 N 0.000
HMEL006147 Heliconius melpomene HMEL006147 N 0.000
KGM_15429 Danaus plexippus KGM_15429 N 0.000
KGM_16996 Danaus plexippus KGM_16996 N 0.000
L798_00373 Zootermopsis nevadensis L798_00373 N 0.000
MCINX005366 Melitaea cinxia MCINX005366 N 0.000
MCINX005367 Melitaea cinxia MCINX005367 N 0.000
AQUA000629 Anopheles quadriannulatus AQUA000629 N 0.000