CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_233-fgenesh-gene-0.3
(
Pythium irregulare
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
maker-pir_contig_233-fgenesh-gene-0.3
T342690_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000017472
TBP
22
104
ELQIKNFVCSANLGMRFDLASLLTKSHKKAELVPKKNCLVMKLAYPKATAMLFANGKLVCTGAETEEAIKGAARKFTQVIQKM
EPrPI00000017472
TBP
113
196
DFKIQNVVGTCELGFRVLVEELSFAHNDHCTYEPELYPALIYRLDKPKVKILVFVSGKVVFTGSKEPRELYAAFDAIVPILRQF
Links
Other
TBP
family TFs
Other
Pythium irregulare
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
0.904
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.892
Phyra84970
Phytophthora ramorum
Phyra84970
N
0.844
fgenesh_scip_prom.46568.971
Phytophthora kernoviae
fgenesh_scip_prom.46568.971
N
0.840
F443_17630
Phytophthora parasitica
F443_17630
N
0.838
HpaG807836
Hyaloperonospora arabidopsidis
HpaG807836
N
0.838
Physo129327
Phytophthora sojae
Physo129327
N
0.835
estExt_fgenesh1_pg.C_110148
Phytophthora capsici
estExt_fgenesh1_pg.C_110148
N
0.826
fgenesh_scip_prom.28083.6999
Phytophthora lateralis
fgenesh_scip_prom.28083.6999
N
0.822
PITG_12304
Phytophthora infestans
PITG_12304
N
0.803
HpaG807837
Hyaloperonospora arabidopsidis
HpaG807837
N
0.782
maker-pve_contig_691-snap-gene-0.13
Pythium vexans
maker-pve_contig_691-snap-gene-0.13
N
0.758
maker-pag1_scaffold_59-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_59-fgenesh-gene-0.7
N
0.753
maker-par_contig_1694-snap-gene-0.3
Pythium arrhenomanes
maker-par_contig_1694-snap-gene-0.3
N
0.705