OSTLU_26716 (Ostreococcus lucimarinus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 OSTLU_26716 T342784_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.783 0.783
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.783 0.783
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.783 0.783
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.777 0.777
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.777 0.777
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.777 0.777
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.777 0.777
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.777 0.777
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.777 0.777
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.777 0.777
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.777 0.777
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.777 0.777
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABO98877 TBP 31 112
ABO98877 TBP 120 203

Links

Other TBP family TFs
Other Ostreococcus lucimarinus TFs

733 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH84196 Xenopus laevis AAH84196 I 0.000
AALB009485 Anopheles albimanus AALB009485 I 0.000
ACEP19585 Atta cephalotes ACEP19585 I 0.000
ADAC007516 Anopheles darlingi ADAC007516 I 0.000
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.000
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.000
AMEC018109 Anopheles melas AMEC018109 I 0.000
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.000
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.000
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.000
CapteG179368 Capitella teleta CapteG179368 I 0.000
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.000
D918_00296 Trichuris suis D918_00296 N 0.000
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.000
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.000
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.000
SMAD4 Bos taurus ENSBTAG00000006919 I 0.000
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.000
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.000
smad4 Ciona intestinalis ENSCING00000005559 I 0.000
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.000
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.000
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.000
SMAD4 Danio rerio ENSDARG00000012649 I 0.000
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.000
SMAD4 Equus caballus ENSECAG00000017857 I 0.000
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.000
SMAD4 Felis catus ENSFCAG00000005257 I 0.000
SMAD4 Homo sapiens ENSG00000141646 D 0.000
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.000
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.000
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.000
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.000
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.000
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.000
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.000
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.000
Smad4 Mus musculus ENSMUSG00000024515 D 0.000
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.000
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.000
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.000
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.000
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.000
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.000
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.000
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.000
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.000
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.000
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.000
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.000
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.000
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.000
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.000
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.000
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.000
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.000
SMAD4 Sorex araneus ENSSARG00000013883 I 0.000
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.000
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.000
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.000
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.000
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.000
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.000
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.000
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.000
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.000
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.000
Med Drosophila melanogaster FBgn0011655 D 0.000
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.000
GF22974 Drosophila ananassae FBgn0099968 I 0.000
GG11819 Drosophila erecta FBgn0104114 I 0.000
GH18642 Drosophila grimshawi FBgn0126109 I 0.000
GI23400 Drosophila mojavensis FBgn0146126 I 0.000
GL23637 Drosophila persimilis FBgn0161227 I 0.000
GM16436 Drosophila sechellia FBgn0171351 I 0.000
GJ23092 Drosophila virilis FBgn0210194 I 0.000
GK11724 Drosophila willistoni FBgn0213735 I 0.000
GE10952 Drosophila yakuba FBgn0228782 I 0.000
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.000
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.000
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.000
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.000
HmN_000727600 Hymenolepis microstoma HmN_000727600 N 0.000
HNAJ_0000282001 Hymenolepis nana HNAJ_0000282001 N 0.000
ISCW018468 Ixodes scapularis ISCW018468 I 0.000
L889_g28104 Steinernema feltiae L889_g28104 I 0.000
L889_g6780 Steinernema feltiae L889_g6780 I 0.000
L898_g17086 Steinernema monticolum L898_g17086 I 0.000
LCUP007928 Lucilia cuprina LCUP007928 I 0.000
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.000
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.000
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.000
MDOA012885 Musca domestica MDOA012885 I 0.000
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.000
Minc05381 Meloidogyne incognita Minc05381 I 0.000
Minc06628 Meloidogyne incognita Minc06628 I 0.000
Minc15475 Meloidogyne incognita Minc15475 N 0.000
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.000
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.000
OFLC_0001382401 Onchocerca flexuosa OFLC_0001382401 I 0.000
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.000
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.000
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.000
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.000
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I 0.000
Smp_033950 Schistosoma mansoni Smp_033950 I 0.000
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I 0.000
SNAPOd2T00000278001 Oikopleura dioica SNAPOd2T00000278001 N 0.000
TC010848 Tribolium castaneum TC010848 I 0.000
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.000
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.000
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.000
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.000
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.000