PHSY_006238 (Pseudozyma hubeiensis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 PHSY_006238 T342811_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.898 0.898
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.898 0.898
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.898 0.898
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.790 0.790
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.790 0.790
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.790 0.790
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.790 0.790
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.790 0.790
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.790 0.790
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.790 0.790
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.790 0.790
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.790 0.790
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAC98644 TBP 64 146
GAC98644 TBP 154 237

Links

Other TBP family TFs
Other Pseudozyma hubeiensis TFs

769 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_01256 Aegilops tauschii F775_01256 I 0.000
F775_03877 Aegilops tauschii F775_03877 I 0.000
AMTR_s00099p00163300 Amborella trichopoda AMTR_s00099p00163300 I 0.000
AMTR_s00059p00187950 Amborella trichopoda AMTR_s00059p00187950 I 0.000
Aquca_014_00018 Aquilegia coerulea Aquca_014_00018 I 0.000
ANAC034 Arabidopsis lyrata fgenesh2_kg.5__152__AT2G02450.1 I 0.000
NAC035 Arabidopsis thaliana AT2G02450 D 0.000
Bostr.0556s0069 Boechera stricta Bostr.0556s0069 I 0.000
BRADI2G57297 Brachypodium distachyon BRADI2G57297 I 0.000
BRADI2G25150 Brachypodium distachyon BRADI2G25150 I 0.000
Bo2g136280 Brassica oleracea Bo2g136280 I 0.000
Bo9g071690 Brassica oleracea Bo9g071690 I 0.000
Bo7g080470 Brassica oleracea Bo7g080470 I 0.000
Bra024818 Brassica rapa Bra024818 I 0.000
Bra026595 Brassica rapa Bra026595 I 0.000
Bra017416 Brassica rapa Bra017416 I 0.000
PK24240.1 Cannabis sativa PK24240.1 I 0.000
Cagra.0534s0046 Capsella grandiflora Cagra.0534s0046 I 0.000
Carubv10017334m.g Capsella rubella Carubv10017334m.g I 0.000
Ca_18171 Cicer arietinum Ca_18171 I 0.000
Cla004630 Citrullus lanatus Cla004630 I 0.000
Ciclev10001346m.g Citrus clementina Ciclev10001346m.g I 0.000
Ciclev10001401m.g Citrus clementina Ciclev10001401m.g I 0.000
orange1.1g046996m.g Citrus sinensis orange1.1g046996m.g I 0.000
orange1.1g016095m.g Citrus sinensis orange1.1g016095m.g I 0.000
Cucsa.260400 Cucumis sativus Cucsa.260400 I 0.000
Eucgr.G00054 Eucalyptus grandis Eucgr.G00054 I 0.000
Thhalv10004330m.g Eutrema salsugineum Thhalv10004330m.g I 0.000
gene29260-v1.0-hybrid Fragaria vesca gene29260-v1.0-hybrid I 0.000
GLYMA17G00650 Glycine max GLYMA17G00650 I 0.000
GLYMA07G40140 Glycine max GLYMA07G40140 I 0.000
Gorai.011G090000 Gossypium raimondii Gorai.011G090000 I 0.000
Gorai.010G142400 Gossypium raimondii Gorai.010G142400 I 0.000
MLOC_57215 Hordeum vulgare MLOC_57215 I 0.000
MLOC_69621 Hordeum vulgare MLOC_69621 I 0.000
LPERR08G01330 Leersia perrieri LPERR08G01330 I 0.000
LPERR05G13320 Leersia perrieri LPERR05G13320 I 0.000
LPERR01G34330 Leersia perrieri LPERR01G34330 I 0.000
Lus10008419.g Linum usitatissimum Lus10008419.g I 0.000
Lus10008897.g Linum usitatissimum Lus10008897.g I 0.000
Lus10008420.g Linum usitatissimum Lus10008420.g I 0.000
Lus10003367.g Linum usitatissimum Lus10003367.g I 0.000
Lus10003366.g Linum usitatissimum Lus10003366.g N 0.000
Lus10023208.g Linum usitatissimum Lus10023208.g I 0.000
chr4.CM0525.60.nd Lotus japonicus chr4.CM0525.60.nd I 0.000
MDP0000189394 Malus domestica MDP0000189394 I 0.000
MDP0000679946 Malus domestica MDP0000679946 I 0.000
cassava17150.m1 Manihot esculenta cassava17150.m1 I 0.000
cassava23178.valid.m1 Manihot esculenta cassava23178.valid.m1 I 0.000
MTR_4g134460 Medicago truncatula MTR_4g134460 I 0.000
mgf015326m Mimulus guttatus mgf015326m I 0.000
GSMUA_Achr10G04320_001 Musa acuminata GSMUA_Achr10G04320_001 I 0.000
GSMUA_Achr10G10690_001 Musa acuminata GSMUA_Achr10G10690_001 I 0.000
GSMUA_Achr3G21690_001 Musa acuminata GSMUA_Achr3G21690_001 I 0.000
GSMUA_Achr5G17060_001 Musa acuminata GSMUA_Achr5G17060_001 I 0.000
GSMUA_Achr7G23650_001 Musa acuminata GSMUA_Achr7G23650_001 I 0.000
GSMUA_Achr11G26450_001 Musa acuminata GSMUA_Achr11G26450_001 N 0.000
GSMUA_Achr11G08970_001 Musa acuminata GSMUA_Achr11G08970_001 I 0.000
OBART08G01010 Oryza barthii OBART08G01010 I 0.000
OBART05G16760 Oryza barthii OBART05G16760 I 0.000
OBART01G39900 Oryza barthii OBART01G39900 I 0.000
OB08G11180 Oryza brachyantha OB08G11180 I 0.000
OB01G48600 Oryza brachyantha OB01G48600 I 0.000
OB05G24670 Oryza brachyantha OB05G24670 I 0.000
ORGLA08G0004000 Oryza glaberrima ORGLA08G0004000 I 0.000
ORGLA05G0144900 Oryza glaberrima ORGLA05G0144900 I 0.000
ORGLA01G0337900 Oryza glaberrima ORGLA01G0337900 I 0.000
OGLUM08G01070 Oryza glumaepatula OGLUM08G01070 I 0.000
OGLUM01G44090 Oryza glumaepatula OGLUM01G44090 I 0.000
OGLUM05G17770 Oryza glumaepatula OGLUM05G17770 I 0.000
BGIOSGA004950 Oryza indica BGIOSGA004950 I 0.000
BGIOSGA004951 Oryza indica BGIOSGA004951 I 0.000
BGIOSGA018041 Oryza indica BGIOSGA018041 I 0.000
BGIOSGA027877 Oryza indica BGIOSGA027877 I 0.000
OLONG_011893 Oryza longistaminata OLONG_011893 I 0.000
OLONG_025605 Oryza longistaminata OLONG_025605 I 0.000
OMERI05G14550 Oryza meridionalis OMERI05G14550 I 0.000
OMERI08G01230 Oryza meridionalis OMERI08G01230 I 0.000
ONIVA01G44740 Oryza nivara ONIVA01G44740 I 0.000
ONIVA05G17420 Oryza nivara ONIVA05G17420 I 0.000
ONIVA08G01010 Oryza nivara ONIVA08G01010 I 0.000
OPUNC05G14760 Oryza punctata OPUNC05G14760 I 0.000
OPUNC01G38590 Oryza punctata OPUNC01G38590 I 0.000
OPUNC08G00950 Oryza punctata OPUNC08G00950 I 0.000
ORUFI01G43220 Oryza rufipogon ORUFI01G43220 I 0.000
ORUFI08G01040 Oryza rufipogon ORUFI08G01040 I 0.000
ORUFI05G17970 Oryza rufipogon ORUFI05G17970 I 0.000
OS01G0888300 Oryza sativa OS01G0888300 I 0.000
OS05G0418800 Oryza sativa OS05G0418800 I 0.000
Pavir.Fa02204 Panicum virgatum Pavir.Fa02204 N 0.000
Pavir.Ea03596 Panicum virgatum Pavir.Ea03596 I 0.000
Pavir.J00477 Panicum virgatum Pavir.J00477 I 0.000
Pavir.J03312 Panicum virgatum Pavir.J03312 I 0.000
Pavir.J07491 Panicum virgatum Pavir.J07491 I 0.000
PDK_20s1594511g001 Phoenix dactylifera PDK_20s1594511g001 I 0.000
POPTR_0003s03670 Populus trichocarpa POPTR_0003s03670 I 0.000
POPTR_0004s23970 Populus trichocarpa POPTR_0004s23970 I 0.000
PRUPE_ppa021989m2g Prunus persica PRUPE_ppa021989m2g I 0.000
30063.m001417 Ricinus communis 30063.m001417 I 0.000
SapurV1A.0847s0050 Salix purpurea SapurV1A.0847s0050 I 0.000
SapurV1A.0198s0420 Salix purpurea SapurV1A.0198s0420 I 0.000
Si001651m.g Setaria italica Si001651m.g I 0.000
Si013995m.g Setaria italica Si013995m.g N 0.000
Si022103m.g Setaria italica Si022103m.g I 0.000
Solyc01g102740.2 Solanum lycopersicum Solyc01g102740.2 I 0.000
PGSC0003DMG400018262 Solanum tuberosum PGSC0003DMG400018262 I 0.000
Sb03g042210 Sorghum bicolor Sb03g042210 I 0.000
Sb09g020590 Sorghum bicolor Sb09g020590 I 0.000
TCM_027945 Theobroma cacao TCM_027945 I 0.000
Traes_3AL_490F09661 Triticum aestivum Traes_3AL_490F09661 I 0.000
TRAES3BF097200010CFD_g Triticum aestivum TRAES3BF097200010CFD_g I 0.000
TRAES3BF098000010CFD_g Triticum aestivum TRAES3BF098000010CFD_g I 0.000
TRAES3BF114300070CFD_g Triticum aestivum TRAES3BF114300070CFD_g I 0.000
Traes_1DL_D79FDE483 Triticum aestivum Traes_1DL_D79FDE483 N 0.000
TRIUR3_28413 Triticum urartu TRIUR3_28413 I 0.000
TRIUR3_29543 Triticum urartu TRIUR3_29543 I 0.000
ANAC034 Vitis vinifera VIT_12s0035g02020 I 0.000
GRMZM2G134687 Zea mays GRMZM2G134687 I 0.000
GRMZM2G147867 Zea mays GRMZM2G147867 I 0.000
GRMZM5G813651 Zea mays GRMZM5G813651 I 0.000