CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_098950
(
Schistosoma mansoni
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
Smp_098950
T342905_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.856
0.856
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.856
0.856
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.856
0.856
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.856
0.856
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.856
0.856
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.856
0.856
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.856
0.856
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.856
0.856
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.856
0.856
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.856
0.856
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW
WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.778
0.778
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.778
0.778
SPT15
M11393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.778
0.778
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_098950.1:pep
TBP
77
159
VPQLQNIVCTVYLGCKLNLKNIALSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQARLAARKYARIIQRL
Smp_098950.1:pep
TBP
167
250
EFKIQNMVGSCDVRFHIRLEGLVLSQGQFATYEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKVREEIYEAFNNIYPILKNF
Links
Other
TBP
family TFs
Other
Schistosoma mansoni
TFs
755 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_06749
Colletotrichum fioriniae
CFIO01_06749
N
0.000
MYCTH_44604
Myceliophthora thermophila
MYCTH_44604
N
0.000
PEX1_002100
Penicillium expansum
PEX1_002100
N
0.000
PFICI_10838
Pestalotiopsis fici
PFICI_10838
N
0.000
PFICI_13498
Pestalotiopsis fici
PFICI_13498
N
0.000
PFICI_13949
Pestalotiopsis fici
PFICI_13949
N
0.000
PODANS_1_4940
Podospora anserina
PODANS_1_4940
N
0.000
PV06_02513
Exophiala oligosperma
PV06_02513
N
0.000
PV10_00327
Exophiala mesophila
PV10_00327
N
0.000
THITE_2056521
Thielavia terrestris
THITE_2056521
N
0.000
UCREL1_8439
Eutypa lata
UCREL1_8439
N
0.000
GLRG_00869
Colletotrichum graminicola
GLRG_00869
N
0.000
GGTG_03662
Gaeumannomyces graminis
GGTG_03662
N
0.000
FVEG_00406
Fusarium verticillioides
FVEG_00406
N
0.000
CH063_08532
Colletotrichum higginsianum
CH063_08532
N
0.000
Cob_11580
Colletotrichum orbiculare
Cob_11580
N
0.000
CPUR_02343
Claviceps purpurea
CPUR_02343
N
0.000
CSUB01_09245
Colletotrichum sublineola
CSUB01_09245
N
0.000
CTHT_0055390
Chaetomium thermophilum
CTHT_0055390
N
0.000
F503_07317
Ophiostoma piceae uamh
F503_07317
N
0.000
FFUJ_00463
Fusarium fujikuroi
FFUJ_00463
N
0.000
FGRRES_00774
Fusarium graminearum
FGRRES_00774
N
0.000
FOXG_01108
Fusarium oxysporum
FOXG_01108
N
0.000
FPSE_09241
Fusarium pseudograminearum
FPSE_09241
N
0.000
UCRPA7_8834
Togninia minima
UCRPA7_8834
N
0.000