Traes_1AL_60B57FD46 (Triticum aestivum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Traes_1AL_60B57FD46 T342958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.843 0.843
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.843 0.843
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.843 0.843
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.825 0.825
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.825 0.825
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.825 0.825
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.825 0.825
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.825 0.825
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.825 0.825
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.825 0.825
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.825 0.825
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.825 0.825
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.825 0.825
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1AL_60B57FD46.2 TBP 56 137
Traes_1AL_60B57FD46.2 TBP 145 228

Links

Other TBP family TFs
Other Triticum aestivum TFs

769 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bcin06g06250 Botrytis cinerea Bcin06g06250 N 0.000
A1O1_00584 Capronia coronata A1O1_00584 N 0.000
Z519_03005 Cladophialophora bantiana Z519_03005 N 0.000
G647_00537 Cladophialophora carrionii G647_00537 N 0.000
PV07_10166 Cladophialophora immunda PV07_10166 N 0.000
A1O5_03686 Cladophialophora psammophila A1O5_03686 N 0.000
A1O7_00496 Cladophialophora yegresii A1O7_00496 N 0.000
CFIO01_01363 Colletotrichum fioriniae CFIO01_01363 N 0.000
GLRG_04468 Colletotrichum graminicola GLRG_04468 N 0.000
CH063_09851 Colletotrichum higginsianum CH063_09851 N 0.000
Cob_08011 Colletotrichum orbiculare Cob_08011 N 0.000
CSUB01_03526 Colletotrichum sublineola CSUB01_03526 N 0.000
W97_06158 Coniosporium apollinis W97_06158 N 0.000
fgenesh1_pg.C_scaffold_4000277 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000277 N 0.000
EPUS_07706 Endocarpon pusillum EPUS_07706 N 0.000
A1O9_04841 Exophiala aquamarina A1O9_04841 N 0.000
PV10_07538 Exophiala mesophila PV10_07538 N 0.000
PV11_08024 Exophiala sideris PV11_08024 N 0.000
PV08_06011 Exophiala spinifera PV08_06011 N 0.000
PV05_11133 Exophiala xenobiotica PV05_11133 N 0.000
Z517_08280 Fonsecaea pedrosoi Z517_08280 N 0.000
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N 0.000
MGG_01624 Magnaporthe oryzae MGG_01624 N 0.000
MBM_04902 Marssonina brunnea MBM_04902 N 0.000
NCU16491 Neurospora crassa NCU16491 N 0.000
aug-scaffold_4.g111 Neurospora discreta aug-scaffold_4.g111 N 0.000
NEUTE1DRAFT_134023 Neurospora tetrasperma NEUTE1DRAFT_134023 N 0.000
PFICI_01871 Pestalotiopsis fici PFICI_01871 N 0.000
PODANS_1_7540 Podospora anserina PODANS_1_7540 N 0.000
V499_01440 Pseudogymnoascus pannorum V499_01440 N 0.000
Z518_04016 Rhinocladiella mackenziei Z518_04016 N 0.000
SAPIO_CDS3171 Scedosporium apiospermum SAPIO_CDS3171 N 0.000
SBOR_0088 Sclerotinia borealis SBOR_0088 N 0.000
SMAC_04819 Sordaria macrospora SMAC_04819 N 0.000
UCRPA7_3950 Togninia minima UCRPA7_3950 N 0.000
PV09_05917 Verruconis gallopava PV09_05917 N 0.000