Traes_5BS_AD70A5AF7 (Triticum aestivum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Traes_5BS_AD70A5AF7 T342965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.882 0.882
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.882 0.882
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.882 0.882
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.819 0.819
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.819 0.819
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.819 0.819
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.819 0.819
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.819 0.819
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.819 0.819
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.819 0.819
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.819 0.819
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.819 0.819
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5BS_AD70A5AF7.3 TBP 1 43
Traes_5BS_AD70A5AF7.3 TBP 51 134

Links

Other TBP family TFs
Other Triticum aestivum TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_37365 Hordeum vulgare MLOC_37365 I 1.000
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.984
Pavir.J18057 Panicum virgatum Pavir.J18057 I 0.983
Pavir.J26398 Panicum virgatum Pavir.J26398 I 0.982
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.976
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.969
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.969
Si023295m.g Setaria italica Si023295m.g I 0.969
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I 0.964
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.961
ORGLA06G0285000 Oryza glaberrima ORGLA06G0285000 I 0.955
OLONG_010453 Oryza longistaminata OLONG_010453 I 0.951
OPUNC01G04710 Oryza punctata OPUNC01G04710 I 0.927
AMTR_s00047p00131170 Amborella trichopoda AMTR_s00047p00131170 I 0.926
Traes_5AS_03EE89960 Triticum aestivum Traes_5AS_03EE89960 I 0.914
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.911
GLOINDRAFT_79885 Rhizophagus irregularis GLOINDRAFT_79885 I 0.906
RO3G_16620 Rhizopus oryzae RO3G_16620 I 0.906
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.904
OLONG_006902 Oryza longistaminata OLONG_006902 I 0.898
DACRYDRAFT_75233 Dacryopinax sp DACRYDRAFT_75233 I 0.874
EURHEDRAFT_409588 Aspergillus ruber EURHEDRAFT_409588 I 0.866
M438DRAFT_342525 Aureobasidium pullulans M438DRAFT_342525 I 0.866
PV04_08198 Capronia semiimmersa PV04_08198 I 0.866
mgf012063m Mimulus guttatus mgf012063m I 0.863
Bra028725 Brassica rapa Bra028725 I 0.858
PV10_01351 Exophiala mesophila PV10_01351 I 0.858
M413DRAFT_438675 Hebeloma cylindrosporum M413DRAFT_438675 I 0.858
M408DRAFT_329006 Serendipita vermifera M408DRAFT_329006 I 0.858
M404DRAFT_1000909 Pisolithus tinctorius M404DRAFT_1000909 I 0.858
SPBR_07999 Sporothrix brasiliensis SPBR_07999 I 0.855
WALSEDRAFT_33220 Wallemia sebi WALSEDRAFT_33220 I 0.850
J056_000874 Wallemia ichthyophaga J056_000874 I 0.850
OPUNC03G21560 Oryza punctata OPUNC03G21560 I 0.845
GYMLUDRAFT_48721 Gymnopus luxurians GYMLUDRAFT_48721 I 0.835
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.827
ACEP14716 Atta cephalotes ACEP14716 I 0.827
ENSOANG00000022637 Ornithorhynchus anatinus ENSOANG00000022637 I 0.824
Aquca_124_00015 Aquilegia coerulea Aquca_124_00015 I 0.819
AB04989.1 Alternaria brassicicola AB04989.1 I 0.818
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.811
TBPL2 Gallus gallus ENSGALG00000012145 I 0.803
K437DRAFT_258899 Tilletiaria anomala K437DRAFT_258899 I 0.803
NBO_6g0091 Nosema bombycis NBO_6g0091 I 0.803
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.803
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.772
TRIUR3_20012 Triticum urartu TRIUR3_20012 I 0.770
F775_26897 Aegilops tauschii F775_26897 I 0.770
chr1.LjT45A19.110.nd Lotus japonicus chr1.LjT45A19.110.nd I 0.769
PK11932.1 Cannabis sativa PK11932.1 I 0.769
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.764
NAPIS_ORF00498 Nosema apis NAPIS_ORF00498 I 0.760
NAPIS_ORF01257 Nosema apis NAPIS_ORF01257 I 0.760
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I 0.759
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.758
PDK_20s1536561g001 Phoenix dactylifera PDK_20s1536561g001 I 0.752
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.752
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.752
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.752
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.752
Si038805m.g Setaria italica Si038805m.g I 0.749
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.749
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.749
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.749
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.749
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.749
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.749
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.743
OS12G0580300 Oryza sativa OS12G0580300 I 0.743
TBP2 Oryza sativa OS03G0657000 I 0.743
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.743
OB03G33300 Oryza brachyantha OB03G33300 I 0.743
OB03G33310 Oryza brachyantha OB03G33310 I 0.743
OBART03G28150 Oryza barthii OBART03G28150 I 0.743
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.743
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.743
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.743
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.743
GLYMA18G44460 Glycine max GLYMA18G44460 I 0.743
OBART12G16890 Oryza barthii OBART12G16890 I 0.743
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.743
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.743
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.743
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.743
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.743
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.743
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.743
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.743
TCM_026453 Theobroma cacao TCM_026453 I 0.741
PK25605.1 Cannabis sativa PK25605.1 I 0.741
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.741
OLONG_012094 Oryza longistaminata OLONG_012094 I 0.741
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.737
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.737
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.737
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.737
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.737
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.737
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.737
29950.m001154 Ricinus communis 29950.m001154 I 0.737
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I 0.737
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.737
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I 0.737
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.737
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.737
GLYMA16G25450 Glycine max GLYMA16G25450 I 0.737
GLYMA03G04500 Glycine max GLYMA03G04500 I 0.737
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.737
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I 0.737
TRIUR3_13880 Triticum urartu TRIUR3_13880 I 0.736
UREG_07344 Uncinocarpus reesii UREG_07344 I 0.732
GSMUA_Achr7G01480_001 Musa acuminata GSMUA_Achr7G01480_001 I 0.732
PRUPE_ppa011675mg Prunus persica PRUPE_ppa011675mg I 0.731
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.731
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I 0.731
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.731
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I 0.731
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.731
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.731
SNAPOd2T00004230001 Oikopleura dioica SNAPOd2T00004230001 I 0.727
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I 0.725
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I 0.725
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I 0.725
mgf009543m Mimulus guttatus mgf009543m I 0.725
mgf012506m Mimulus guttatus mgf012506m I 0.723
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I 0.719
e_gw1.13.259.1 Physcomitrella patens e_gw1.13.259.1 I 0.719
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I 0.719
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I 0.719
ANCDUO_13676 Ancylostoma duodenale ANCDUO_13676 I 0.717
Bra030855 Brassica rapa Bra030855 I 0.713
Bo6g051360 Brassica oleracea Bo6g051360 I 0.713
Bo3g185290 Brassica oleracea Bo3g185290 I 0.713
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.713
Bra011920 Brassica rapa Bra011920 I 0.713
Cla011298 Citrullus lanatus Cla011298 I 0.711
Contig262.1.g32 Oxytricha trifallax Contig262.1.g32 I 0.709
L596_g25394 Steinernema carpocapsae L596_g25394 I 0.709
TCM_001402 Theobroma cacao TCM_001402 I 0.709
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.707
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I 0.707
Ca_19794 Cicer arietinum Ca_19794 N 0.707
MLOC_50796 Hordeum vulgare MLOC_50796 I 0.705
Traes_1BS_2CB2C53C1 Triticum aestivum Traes_1BS_2CB2C53C1 I 0.705
Traes_1BL_2CB2C53C1 Triticum aestivum Traes_1BL_2CB2C53C1 I 0.705
BRADI3G27190 Brachypodium distachyon BRADI3G27190 I 0.705
TRIUR3_32346 Triticum urartu TRIUR3_32346 I 0.705
Traes_1AL_60B57FD46 Triticum aestivum Traes_1AL_60B57FD46 I 0.705
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I 0.705
MDP0000289755 Malus domestica MDP0000289755 I 0.704
RO3G_15549 Rhizopus oryzae RO3G_15549 I 0.703
gene04978-v1.0-hybrid Fragaria vesca gene04978-v1.0-hybrid N 0.703
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.701
TBP2 Arabidopsis thaliana AT1G55520 I 0.701
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.701