e_gw1.8.279.1 (Sporobolomyces roseus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 e_gw1.8.279.1 T343110_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.898 0.898
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.898 0.898
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.898 0.898
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.802 0.802
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.802 0.802
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.802 0.802
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.802 0.802
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.802 0.802
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.802 0.802
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.802 0.802
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.802 0.802
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.802 0.802
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.8.279.1 TBP 79 161
e_gw1.8.279.1 TBP 169 252

Links

Other TBP family TFs
Other Sporobolomyces roseus TFs

750 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000004929 Ailuropoda melanoleuca ENSAMEG00000004929 I 0.000
ENSBTAP00000018112-D2 Bos grunniens ENSBTAP00000018112-D2 I 0.000
ZNF805 Callithrix jacchus ENSCJAG00000000024 I 0.000
ENSCSAG00000001654 Chlorocebus sabaeus ENSCSAG00000001654 I 0.000
ZNF805 Gorilla gorilla ENSGGOG00000011685 I 0.000
ZNF805 Homo sapiens ENSG00000204524 D 0.000
ENSSTOG00000020968 Ictidomys tridecemlineatus ENSSTOG00000020968 I 0.000
ENSP00000412999 Macaca fascicularis ENSP00000412999 I 0.000
ENSNLEG00000010916 Nomascus leucogenys ENSNLEG00000010916 I 0.000
ZNF805 Otolemur garnettii ENSOGAG00000033139 I 0.000
ENSOARG00000003593 Ovis aries ENSOARG00000003593 I 0.000
ZNF805 Pan troglodytes ENSPTRG00000028870 I 0.000
ENSPANG00000002294 Papio anubis ENSPANG00000002294 I 0.000
ENSPPYG00000010459 Pongo abelii ENSPPYG00000010459 I 0.000