Aquca_124_00015 (Aquilegia coerulea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 Aquca_124_00015 T343148_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.758 0.758
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.758 0.758
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.758 0.758
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.733 0.733
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.733 0.733
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.733 0.733
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.733 0.733
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.733 0.733
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.733 0.733
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.733 0.733
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.733 0.733
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.733 0.733
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_124_00015.1 TBP 12 94
Aquca_124_00015.1 TBP 102 183

Links

Other TBP family TFs
Other Aquilegia coerulea TFs

664 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
naif1.S Xenopus laevis XB-GENE-986896 D 0.000
naif1 Xenopus tropicalis XB-GENE-986890 D 0.000
NAIF1_CHICK Gallus gallus NAIF1_CHICK D 0.000
Naif1 Rattus norvegicus ENSRNOG00000050204 I 0.000
NAIF1 Pteropus vampyrus ENSPVAG00000002431 I 0.000
NAIF1 Pan troglodytes ENSPTRG00000021409 I 0.000
ENSPSIG00000007027 Pelodiscus sinensis ENSPSIG00000007027 I 0.000
ENSPPYG00000019640 Pongo abelii ENSPPYG00000019640 I 0.000
ENSPFOG00000005824 Poecilia formosa ENSPFOG00000005824 I 0.000
NAIF1 Procavia capensis ENSPCAG00000011530 I 0.000
naif1 Oryzias latipes ENSORLG00000018283 I 0.000
ENSOPRG00000016390 Ochotona princeps ENSOPRG00000016390 I 0.000
ENSONIG00000012590 Oreochromis niloticus ENSONIG00000012590 I 0.000
NAIF1 Otolemur garnettii ENSOGAG00000031498 I 0.000
NAIF1 Sorex araneus ENSSARG00000011449 I 0.000
NAIF1 Sus scrofa ENSSSCG00000005630 I 0.000
ENSSTOG00000007837 Ictidomys tridecemlineatus ENSSTOG00000007837 I 0.000
Pvit_08550 Pogona vitticeps Pvit_08550 I 0.000
ENSP00000362170 Macaca fascicularis ENSP00000362170 I 0.000
ENSBTAP00000016123-D1 Bos grunniens ENSBTAP00000016123-D1 I 0.000
Brh_R009924 Buceros rhinoceros Brh_R009924 I 0.000
Afo_R001565 Aptenodytes forsteri Afo_R001565 I 0.000
Aan_R009291 Calypte anna Aan_R009291 I 0.000
ENSXMAG00000013359 Xiphophorus maculatus ENSXMAG00000013359 I 0.000
NAIF1 Tursiops truncatus ENSTTRG00000016473 I 0.000
ENSTSYG00000001421 Tarsius syrichta ENSTSYG00000001421 I 0.000
naif1 Takifugu rubripes ENSTRUG00000013589 I 0.000
NAIF1 Taeniopygia guttata ENSTGUG00000003526 I 0.000
NAIF1 Oryctolagus cuniculus ENSOCUG00000013385 I 0.000
ENSOARG00000010974 Ovis aries ENSOARG00000010974 I 0.000
NAIF1 Felis catus ENSFCAG00000001494 I 0.000
ENSFALG00000001298 Ficedula albicollis ENSFALG00000001298 I 0.000
NAIF1 Erinaceus europaeus ENSEEUG00000009746 I 0.000
NAIF1 Equus caballus ENSECAG00000014827 I 0.000
NAIF1 Dasypus novemcinctus ENSDNOG00000034148 I 0.000
naif1 Danio rerio ENSDARG00000062753 I 0.000
ENSCSAG00000013989 Chlorocebus sabaeus ENSCSAG00000013989 I 0.000
ENSCPOG00000008322 Cavia porcellus ENSCPOG00000008322 I 0.000
NAIF1 Callithrix jacchus ENSCJAG00000019895 I 0.000
NAIF1 Canis familiaris ENSCAFG00000020093 I 0.000
NAIF1 Bos taurus ENSBTAG00000012156 I 0.000
ENSAMXG00000012133 Astyanax mexicanus ENSAMXG00000012133 I 0.000
NAIF1 Homo sapiens ENSG00000171169 I 0.000
naif1 Gasterosteus aculeatus ENSGACG00000018458 I 0.000
NAIF1 Gallus gallus ENSGALG00000027734 I 0.000
ENSNLEG00000017520 Nomascus leucogenys ENSNLEG00000017520 I 0.000
Naif1 Mus musculus ENSMUSG00000039164 I 0.000
ENSMPUG00000013510 Mustela putorius furo ENSMPUG00000013510 I 0.000
NAIF1 Monodelphis domestica ENSMODG00000005695 I 0.000
NAIF1 Macaca mulatta ENSMMUG00000004685 I 0.000
NAIF1 Myotis lucifugus ENSMLUG00000013565 I 0.000
ENSMICG00000012773 Microcebus murinus ENSMICG00000012773 I 0.000
NAIF1 Meleagris gallopavo ENSMGAG00000003576 I 0.000
ENSMEUG00000000224 Macropus eugenii ENSMEUG00000000224 I 0.000
NAIF1 Loxodonta africana ENSLAFG00000031104 I 0.000
ENSLACG00000016334 Latimeria chalumnae ENSLACG00000016334 I 0.000
NAIF1 Gorilla gorilla ENSGGOG00000011178 I 0.000
ENSAMEG00000015231 Ailuropoda melanoleuca ENSAMEG00000015231 I 0.000