AB04989.1 (Alternaria brassicicola)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 AB04989.1 T343267_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.891 0.891
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.891 0.891
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.891 0.891
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.800 0.800
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.800 0.800
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.800 0.800
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.800 0.800
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.800 0.800
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.800 0.800
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.800 0.800
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.800 0.800
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.800 0.800
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AB04989.1 TBP 1 26
AB04989.1 TBP 34 117

Links

Other TBP family TFs
Other Alternaria brassicicola TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_44722 Agaricus bisporus AGABI2DRAFT_44722 I 0.845
M378DRAFT_176716 Amanita muscaria M378DRAFT_176716 I 0.845
AMTR_s00047p00131170 Amborella trichopoda AMTR_s00047p00131170 I 0.811
Aqu1.225918 Amphimedon queenslandica Aqu1.225918 I 0.773
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.800
ANCDUO_13676 Ancylostoma duodenale ANCDUO_13676 I 0.727
H311_04080 Anncaliia algerae H311_04080 I 0.755
GB47180 Apis mellifera GB47180 I 0.818
Aquca_124_00015 Aquilegia coerulea Aquca_124_00015 I 0.745
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.802
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.800
MCYG_00725 Arthroderma otae MCYG_00725 I 0.945
EURHEDRAFT_409588 Aspergillus ruber EURHEDRAFT_409588 I 0.835
ACEP14716 Atta cephalotes ACEP14716 I 0.809
M438DRAFT_342525 Aureobasidium pullulans M438DRAFT_342525 I 0.819
BDDG_03170 Blastomyces dermatitidis BDDG_03170 I 0.945
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I 0.782
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.800
Bo6g051360 Brassica oleracea Bo6g051360 I 0.800
Bo2g007300 Brassica oleracea Bo2g007300 I 0.745
Bra028725 Brassica rapa Bra028725 I 0.736
CBG09138 Caenorhabditis briggsae CBG09138 I 0.709
CJA15284 Caenorhabditis japonica CJA15284 I 0.709
CRE07760 Caenorhabditis remanei CRE07760 I 0.709
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.809
CORT_0A11870 Candida orthopsilosis CORT_0A11870 I 0.891
CPAG_04505 Candida parapsilosis CPAG_04505 I 0.891
TBPL2 Canis familiaris ENSCAFG00000015052 I 0.782
PV04_08198 Capronia semiimmersa PV04_08198 I 0.927
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.800
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.800
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.764
CHLREDRAFT_144556 Chlamydomonas reinhardtii CHLREDRAFT_144556 I 0.755
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.809
PV07_11953 Cladophialophora immunda PV07_11953 I 0.927
CIMG_11148 Coccidioides immitis CIMG_11148 I 0.945
CPC735_006990 Coccidioides posadasii CPC735_006990 I 0.945
DACRYDRAFT_75233 Dacryopinax sp DACRYDRAFT_75233 I 0.855
KGM_04261 Danaus plexippus KGM_04261 I 0.818
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.809
ATG14 Dasypus novemcinctus ENSDNOG00000015108 I 0.782
DME_0000305201 Dracunculus medinensis DME_0000305201 I 0.718
GI18943 Drosophila mojavensis FBgn0141682 I 0.809
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.745
Thhalv10022351m.g Eutrema salsugineum Thhalv10022351m.g I 0.764
UCREL1_11678 Eutypa lata UCREL1_11678 I 0.936
PV10_01351 Exophiala mesophila PV10_01351 I 0.927
PV06_02313 Exophiala oligosperma PV06_02313 I 0.927
PV11_06323 Exophiala sideris PV11_06323 I 0.927
PV05_09095 Exophiala xenobiotica PV05_09095 I 0.927
FIBRA_07233 Fibroporia radiculosa FIBRA_07233 I 0.845
FOMPIDRAFT_1017649 Fomitopsis pinicola FOMPIDRAFT_1017649 I 0.845
Z517_03367 Fonsecaea pedrosoi Z517_03367 I 0.927
GALMADRAFT_264138 Galerina marginata GALMADRAFT_264138 I 0.845
TBPL2 Gallus gallus ENSGALG00000012145 I 0.800
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.809
CMQ_1115 Grosmannia clavigera CMQ_1115 I 0.918
GYMLUDRAFT_48721 Gymnopus luxurians GYMLUDRAFT_48721 I 0.704
HHAL004028-PA Halyomorpha halys HHAL004028-PA I 0.818
M413DRAFT_438675 Hebeloma cylindrosporum M413DRAFT_438675 I 0.732
HMEL016424 Heliconius melpomene HMEL016424 I 0.818
estExt_fgenesh3_kg.C_20416 Heterobasidion annosum estExt_fgenesh3_kg.C_20416 I 0.845
HETIRDRAFT_242765 Heterobasidion irregulare HETIRDRAFT_242765 I 0.845
HCBG_06828 Histoplasma capsulatum HCBG_06828 I 0.945
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.818
HmN_000119900 Hymenolepis microstoma HmN_000119900 I 0.745
HNAJ_0000219201 Hymenolepis nana HNAJ_0000219201 I 0.745
Lus10031531.g Linum usitatissimum Lus10031531.g I 0.709
LELG_01062 Lodderomyces elongisporus LELG_01062 I 0.891
LotgiG129673 Lottia gigantea LotgiG129673 I 0.782
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.836
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.800
MCINX007129 Melitaea cinxia MCINX007129 I 0.818
MVLG_00350 Microbotryum violaceum MVLG_00350 I 0.855
TBPL2 Microcebus murinus ENSMICG00000000943 I 0.791
DI09_319p10 Microsporidia sp DI09_319p10 I 0.864
MGYG_01238 Microsporum gypseum MGYG_01238 I 0.945
mgf009543m Mimulus guttatus mgf009543m I 0.818
ML03273a Mnemiopsis leidyi ML03273a I 0.736
Moror_8271 Moniliophthora roreri Moror_8271 I 0.845
e_gw1.1.2234.1 Mucor circinelloides e_gw1.1.2234.1 I 0.873
e_gw1.11.241.1 Mucor circinelloides e_gw1.11.241.1 I 0.873
e_gw1.11.176.1 Naegleria gruberi e_gw1.11.176.1 I 0.782
NAPIS_ORF00497 Nosema apis NAPIS_ORF00497 I 0.745
NAPIS_ORF01258 Nosema apis NAPIS_ORF01258 I 0.745
SNAPOd2T00004230001 Oikopleura dioica SNAPOd2T00004230001 I 0.709
ORGLA06G0285000 Oryza glaberrima ORGLA06G0285000 I 0.802
ORGLA10G0095800 Oryza glaberrima ORGLA10G0095800 I 0.791
BGIOSGA031868 Oryza indica BGIOSGA031868 I 0.791
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.818
OLONG_010453 Oryza longistaminata OLONG_010453 I 0.786
OMERI10G08240 Oryza meridionalis OMERI10G08240 I 0.791
ONIVA01G08510 Oryza nivara ONIVA01G08510 I 0.791
OPUNC03G21560 Oryza punctata OPUNC03G21560 I 0.707
OPUNC01G04710 Oryza punctata OPUNC01G04710 I 0.780
ORUFI10G11330 Oryza rufipogon ORUFI10G11330 I 0.791
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.818
OS10G0432300 Oryza sativa OS10G0432300 I 0.791
tbp Oryzias latipes ENSORLG00000010757 I 0.782
ENSOARG00000015944 Ovis aries ENSOARG00000015944 I 0.755
Pavir.J18057 Panicum virgatum Pavir.J18057 I 0.773
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I 0.809
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.827
Pavir.J26398 Panicum virgatum Pavir.J26398 I 0.826
PHUM533080 Pediculus humanus PHUM533080 I 0.827
PDE_04702 Penicillium oxalicum PDE_04702 I 0.955
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I 0.809
PHACADRAFT_256913 Phanerochaete carnosa PHACADRAFT_256913 I 0.845
gwh2.1.1035.1 Phanerochaete chrysosporium gwh2.1.1035.1 I 0.845
PHLGIDRAFT_111859 Phlebiopsis gigantea PHLGIDRAFT_111859 I 0.845
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I 0.809
fgeneshPB_pg.12__294 Phycomyces blakesleeanus fgeneshPB_pg.12__294 I 0.873
e_gwh1.1.1.994.1 Pichia stipitis e_gwh1.1.1.994.1 I 0.891
PILCRDRAFT_51869 Piloderma croceum PILCRDRAFT_51869 I 0.845
PIIN_00750 Piriformospora indica PIIN_00750 I 0.855
PISMIDRAFT_684343 Pisolithus microcarpus PISMIDRAFT_684343 I 0.845
M404DRAFT_1000909 Pisolithus tinctorius M404DRAFT_1000909 I 0.732
PredSwiss_EST785.1 Pneumocystis carinii PredSwiss_EST785.1 I 0.909
PredSwiss_ASS2010_1907.1 Pneumocystis carinii PredSwiss_ASS2010_1907.1 I 0.909
PNEG_00724 Pneumocystis murina PNEG_00724 I 0.909
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.800
PPA00840 Pristionchus pacificus PPA00840 I 0.727
RSKR_0000436900 Rhabditophanes kr3021 RSKR_0000436900 I 0.736
GLOINDRAFT_79885 Rhizophagus irregularis GLOINDRAFT_79885 I 0.873
RO3G_16620 Rhizopus oryzae RO3G_16620 I 0.882
RHTO_08020 Rhodosporidium toruloides RHTO_08020 I 0.845
SU7_0942 Saccharomyces arboricola SU7_0942 I 0.891
SKUD_163604 Saccharomyces kudriavzevii SKUD_163604 I 0.891
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.827
PICST_38880 Scheffersomyces stipitis PICST_38880 I 0.891
SPOG_00351 Schizosaccharomyces cryophilus SPOG_00351 I 0.882
SJAG_00421 Schizosaccharomyces japonicus SJAG_00421 I 0.909
SOCG_04191 Schizosaccharomyces octosporus SOCG_04191 I 0.882
tbp1 Schizosaccharomyces pombe SPAC29E6.08 I 0.882
SMU15013179 Schmidtea mediterranea SMU15013179 I 0.764
SCLCIDRAFT_144717 Scleroderma citrinum SCLCIDRAFT_144717 I 0.845
SELMODRAFT_16705 Selaginella moellendorffii SELMODRAFT_16705 I 0.818
SELMODRAFT_37142 Selaginella moellendorffii SELMODRAFT_37142 I 0.818
M408DRAFT_329006 Serendipita vermifera M408DRAFT_329006 I 0.732
SERLA73DRAFT_76226 Serpula lacrymans SERLA73DRAFT_76226 I 0.845
Si023295m.g Setaria italica Si023295m.g I 0.701
Sb01g017130 Sorghum bicolor Sb01g017130 I 0.773
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.818
SPAPADRAFT_58486 Spathaspora passalidarum SPAPADRAFT_58486 I 0.891
SPBR_07999 Sporothrix brasiliensis SPBR_07999 I 0.927
SPBR_06113 Sporothrix brasiliensis SPBR_06113 I 0.900
trf3 Takifugu rubripes ENSTRUG00000009283 I 0.782
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I 0.782
K437DRAFT_258899 Tilletiaria anomala K437DRAFT_258899 I 0.818
THOM_0429 Trachipleistophora hominis THOM_0429 I 0.782
BN946_scf185000.g31 Trametes cinnabarina BN946_scf185000.g31 I 0.845
TC008403 Tribolium castaneum TC008403 I 0.818
D917_07868 Trichinella nativa D917_07868 I 0.718
EFV53163 Trichinella spiralis EFV53163 I 0.718
H101_08207 Trichophyton interdigitale H101_08207 I 0.945
H102_07668 Trichophyton rubrum H102_07668 I 0.945
H105_07693 Trichophyton soudanense H105_07693 I 0.945
TESG_08364 Trichophyton tonsurans TESG_08364 I 0.945
TRV_02367 Trichophyton verrucosum TRV_02367 I 0.927
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.782
A1Q1_08290 Trichosporon asahii A1Q1_08290 I 0.855
Traes_5AS_03EE89960 Triticum aestivum Traes_5AS_03EE89960 I 0.818
Traes_5BS_AD70A5AF7 Triticum aestivum Traes_5BS_AD70A5AF7 I 0.818
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.827
Tal_R008176 Tyto alba Tal_R008176 I 0.764
UREG_07344 Uncinocarpus reesii UREG_07344 I 0.755
VCUG_02118 Vavraia culicis VCUG_02118 I 0.782
PV09_01314 Verruconis gallopava PV09_01314 I 0.936
J056_000874 Wallemia ichthyophaga J056_000874 I 0.836
WALSEDRAFT_33220 Wallemia sebi WALSEDRAFT_33220 I 0.836
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.791
GRMZM2G466938 Zea mays GRMZM2G466938 I 0.709
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.836
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.709
L798_06544 Zootermopsis nevadensis L798_06544 N 0.709