CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_30071
(
Phytophthora capsici
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
estExt_Genewise1Plus.C_30071
T343279_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_30071
TBP
54
136
EVKIMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGGTSEESCRLAARKFTRVIQKL
estExt_Genewise1Plus.C_30071
TBP
144
227
EFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYEPELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQY
Links
Other
TBP
family TFs
Other
Phytophthora capsici
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITG_07312
Phytophthora infestans
PITG_07312
N
0.994
F443_17719
Phytophthora parasitica
F443_17719
N
0.994
Phyra44780
Phytophthora ramorum
Phyra44780
N
0.988
fgenesh_scip_prom.28083.3030
Phytophthora lateralis
fgenesh_scip_prom.28083.3030
N
0.988
Physo111770
Phytophthora sojae
Physo111770
N
0.976
maker-pve_contig_833-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_833-fgenesh-gene-0.1
N
0.970
maker-piw_contig_412-fgenesh-gene-0.6
Pythium iwayamai
maker-piw_contig_412-fgenesh-gene-0.6
N
0.970
maker-pir_contig_920-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_920-fgenesh-gene-0.2
N
0.970
fgenesh_scip_prom.46568.9728
Phytophthora kernoviae
fgenesh_scip_prom.46568.9728
N
0.964
PYU1_G013989
Pythium ultimum
PYU1_G013989
N
0.952
HpaG813721
Hyaloperonospora arabidopsidis
HpaG813721
N
0.912
fgenesh_masked-pag1_scaffold_1-abinit-gene-1.110
Pythium aphanidermatum
fgenesh_masked-pag1_scaffold_1-abinit-gene-1.110
N
0.843
ALNC14_032430
Albugo laibachii
ALNC14_032430
N
0.808
SPRG_03180
Saprolegnia parasitica
SPRG_03180
N
0.701