ANCDUO_13676 (Ancylostoma duodenale)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 ANCDUO_13676 T343409_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.827 0.827
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.827 0.827
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.827 0.827
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.827 0.827
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.827 0.827
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.827 0.827
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.827 0.827
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.827 0.827
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.827 0.827
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.827 0.827
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW

WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.732 0.732
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB

VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.732 0.732
SPT15
M11393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_13676 TBP 1 43
ANCDUO_13676 TBP 51 134

Links

Other TBP family TFs
Other Ancylostoma duodenale TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAI26006 Xenopus laevis AAI26006 I 0.000
Aan_R001655 Calypte anna Aan_R001655 I 0.000
AAO72733 Xenopus laevis AAO72733 I 0.000
ABF71072 Xenopus laevis ABF71072 I 0.000
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.000
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.000
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.000
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.000
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.000
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.000
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.000
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.000
ENSONIG00000020112 Oreochromis niloticus ENSONIG00000020112 N 0.000
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.000
ENSPMAG00000000126 Petromyzon marinus ENSPMAG00000000126 N 0.000
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.000
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.000
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.000
epas1b Danio rerio ENSDARG00000057671 N 0.000
Gfo_R006824 Geospiza fortis Gfo_R006824 I 0.000
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.000
HIF1A Homo sapiens ENSG00000100644 D 0.000
HIF1A Gallus gallus ENSGALG00000011870 I 0.000
HIF1A Meleagris gallopavo ENSMGAG00000013552 I 0.000
hif1a Xenopus tropicalis XB-GENE-946622 I 0.000
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.000
Hif1a Mus musculus ENSMUSG00000021109 D 0.000
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.000
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.000
Tal_R011146 Tyto alba Tal_R011146 I 0.000