NBR_0001088401 (Nippostrongylus brasiliensis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 NBR_0001088401 T343555_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW

WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.703 0.703
TBP
M08231_2.00
Homo sapiens
YATTTGCATD

HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.703 0.703
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS

SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.703 0.703
Tbp
M09433_2.00
Mus musculus
VTATAAAARS

SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.703 0.703
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.703 0.703
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD

HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.703 0.703
TBP
M11390_2.00
Homo sapiens
KATAAATW

WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.703 0.703
TBP
M11391_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.703 0.703
TBP
M11392_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.703 0.703
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN

NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001088401-mRNA-1 TBP 11 85
NBR_0001088401-mRNA-1 TBP 93 176

Links

Other TBP family TFs
Other Nippostrongylus brasiliensis TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HPLM_0001046201 Haemonchus placei HPLM_0001046201 I 0.924
NECAME_12365 Necator americanus NECAME_12365 I 0.918
ANCCAN_00844 Ancylostoma caninum ANCCAN_00844 I 0.911
ANCCEY_00955 Ancylostoma ceylanicum ANCCEY_00955 I 0.911
OESDEN_10436 Oesophagostomum dentatum OESDEN_10436 N 0.873
HCOI01672500 Haemonchus contortus HCOI01672500 I 0.867
HCOI00585200 Haemonchus contortus HCOI00585200 I 0.766
TCNE_0001669001 Toxocara canis TCNE_0001669001 I 0.766
HCOI02047500 Haemonchus contortus HCOI02047500 I 0.766
HPBE_0000236501 Heligmosomoides bakeri HPBE_0000236501 I 0.766
NECAME_03068 Necator americanus NECAME_03068 I 0.766
DICVIV_03239 Dictyocaulus viviparus DICVIV_03239 I 0.766
ANCCAN_09966 Ancylostoma caninum ANCCAN_09966 I 0.766
ANCCEY_07137 Ancylostoma ceylanicum ANCCEY_07137 I 0.766
ANCDUO_27670 Ancylostoma duodenale ANCDUO_27670 I 0.766
CBG09138 Caenorhabditis briggsae CBG09138 I 0.759
CRE07760 Caenorhabditis remanei CRE07760 I 0.759
CBN01059 Caenorhabditis brenneri CBN01059 I 0.759
PPA00840 Pristionchus pacificus PPA00840 I 0.759
scaffold547-EXSNAP2012.2 Pristionchus exspectatus scaffold547-EXSNAP2012.2 I 0.759
tbp-1 Caenorhabditis elegans WBGene00006542 I 0.759
CJA15284 Caenorhabditis japonica CJA15284 I 0.759
ANCDUO_08400 Ancylostoma duodenale ANCDUO_08400 I 0.753
DME_0000305201 Dracunculus medinensis DME_0000305201 I 0.753
TTRE_0000685401 Trichuris trichiura TTRE_0000685401 I 0.753
TMUE_s0157001700 Trichuris muris TMUE_s0157001700 I 0.753
nRc.2.0.1.g22836 Romanomermis culicivorax nRc.2.0.1.g22836 I 0.747
RSKR_0000436900 Rhabditophanes kr3021 RSKR_0000436900 I 0.747
D918_02710 Trichuris suis D918_02710 I 0.747
BXY_1660200 Bursaphelenchus xylophilus BXY_1660200 I 0.747
L596_g25394 Steinernema carpocapsae L596_g25394 I 0.734
D917_07868 Trichinella nativa D917_07868 I 0.734
WUBG_07006 Wuchereria bancrofti WUBG_07006 I 0.734
SVE_0506100 Strongyloides venezuelensis SVE_0506100 I 0.734
EFV53163 Trichinella spiralis EFV53163 I 0.734
SPAL_0001018500 Strongyloides papillosus SPAL_0001018500 I 0.734
SSTP_0000124500 Strongyloides stercoralis SSTP_0000124500 I 0.734
PTRK_0001233700 Parastrongyloides trichosuri PTRK_0001233700 I 0.734
CpipJ_CPIJ007600 Culex pipiens CpipJ_CPIJ007600 I 0.728
CpipJ_CPIJ018368 Culex pipiens CpipJ_CPIJ018368 I 0.728
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.728
CPIJ018368 Culex quinquefasciatus CPIJ018368 I 0.728
AAEL012330 Aedes aegypti AAEL012330 I 0.728
CPIJ007600 Culex quinquefasciatus CPIJ007600 I 0.728
HHAL004028-PA Halyomorpha halys HHAL004028-PA I 0.728
L898_g32593 Steinernema monticolum L898_g32593 I 0.728
L889_g25192 Steinernema feltiae L889_g25192 I 0.728
SMAR002219 Strigamia maritima SMAR002219 I 0.728
ACOC_0000950001 Angiostrongylus costaricensis ACOC_0000950001 I 0.725
EVEC_0000621801 Enterobius vermicularis EVEC_0000621801 I 0.725
ACAC_0000032501 Angiostrongylus cantonensis ACAC_0000032501 I 0.725
SMUV_0000093601 Syphacia muris SMUV_0000093601 I 0.725
SPU_012621 Strongylocentrotus purpuratus SPU_012621 I 0.722
SPU_014099 Strongylocentrotus purpuratus SPU_014099 I 0.722
ADAC000533 Anopheles darlingi ADAC000533 I 0.722
tetur35g00490 Tetranychus urticae tetur35g00490 I 0.722
ATG14 Dasypus novemcinctus ENSDNOG00000015108 I 0.722
ENSPPYG00000005840 Pongo abelii ENSPPYG00000005840 I 0.722
AALB006989 Anopheles albimanus AALB006989 I 0.722
L798_11200 Zootermopsis nevadensis L798_11200 I 0.722
TBPL2 Pteropus vampyrus ENSPVAG00000001280 I 0.722
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.722
TBPL2 Gallus gallus ENSGALG00000012145 I 0.722
ENSMPUG00000005807 Mustela putorius furo ENSMPUG00000005807 I 0.722
TBPL2 Microcebus murinus ENSMICG00000000943 I 0.722
BTMF_0000332301 Brugia timori BTMF_0000332301 I 0.719
nOo.2.0.1.g04267 Onchocerca ochengi nOo.2.0.1.g04267 I 0.719
TCLT_0000047501 Thelazia callipaeda TCLT_0000047501 I 0.719
Bm5856 Brugia malayi Bm5856 I 0.719
LOAG_01904 Loa loa LOAG_01904 I 0.719
WBGene00245666 Onchocerca volvulus WBGene00245666 I 0.719
nAv.1.0.1.g05339 Acanthocheilonema viteae nAv.1.0.1.g05339 I 0.719
nLs.2.1.2.g02336 Litomosoides sigmodontis nLs.2.1.2.g02336 I 0.719
EEL_0000831901 Elaeophora elaphi EEL_0000831901 I 0.719
OESDEN_06921 Oesophagostomum dentatum OESDEN_06921 I 0.719
nDi.2.2.2.g01504 Dirofilaria immitis nDi.2.2.2.g01504 I 0.719
GB47180 Apis mellifera GB47180 I 0.715
Hsal_00478--XP_623088.1_APIME Harpegnathos saltator Hsal_00478--XP_623088.1_APIME I 0.715
ENSLACG00000019034 Latimeria chalumnae ENSLACG00000019034 I 0.715
HMEL016424 Heliconius melpomene HMEL016424 I 0.715
Pvit_04001 Pogona vitticeps Pvit_04001 I 0.715
SINV24483 Solenopsis invicta SINV24483 I 0.715
Afo_R014360 Aptenodytes forsteri Afo_R014360 I 0.715
PHUM533080 Pediculus humanus PHUM533080 I 0.715
MCINX007129 Melitaea cinxia MCINX007129 I 0.715
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.715
KGM_04261 Danaus plexippus KGM_04261 I 0.715
Sakowv30026288m.g Saccoglossus kowalevskii Sakowv30026288m.g I 0.715
ENSPSIG00000010865 Pelodiscus sinensis ENSPSIG00000010865 I 0.715
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.715
XP_002160884.1 Hydra magnipapillata XP_002160884.1 I 0.715
XP_002160918.1 Hydra magnipapillata XP_002160918.1 I 0.715
ACEP14716 Atta cephalotes ACEP14716 I 0.715
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I 0.715
BGIBMGA010619 Bombyx mori BGIBMGA010619 I 0.715
SVUK_0000188301 Strongylus vulgaris SVUK_0000188301 I 0.714
TBPL2 Canis familiaris ENSCAFG00000015052 I 0.709
TBPL2 Tursiops truncatus ENSTTRG00000002034 I 0.709
LDEC008856 Leptinotarsa decemlineata LDEC008856 I 0.709
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.709
ACYPI001633 Acyrthosiphon pisum ACYPI001633 I 0.709
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I 0.709
trf3 Takifugu rubripes ENSTRUG00000009283 I 0.709
TC008403 Tribolium castaneum TC008403 I 0.709
Afo_R001483 Aptenodytes forsteri Afo_R001483 I 0.703
LLOJ006615 Lutzomyia longipalpis LLOJ006615 I 0.703
Alligator_sinensis_CCG013163.1 Alligator sinensis Alligator_sinensis_CCG013163.1 I 0.703
PPAI004956 Phlebotomus papatasi PPAI004956 I 0.703
MDOA014641 Musca domestica MDOA014641 I 0.703
tbp.S Xenopus laevis XB-GENE-865786 I 0.703
tbp Xenopus tropicalis XB-GENE-488470 I 0.703
Myotis_brandtii_FAM120B_10014687 Myotis brandtii Myotis_brandtii_FAM120B_10014687 I 0.703
Ogr19073 Ophisaurus gracilis Ogr19073 I 0.703
Pvit_02083 Pogona vitticeps Pvit_02083 I 0.703
Gfo_R009933 Geospiza fortis Gfo_R009933 I 0.703
ENSP00000375942 Macaca fascicularis ENSP00000375942 I 0.703
tbp.L Xenopus laevis XB-GENE-6253887 I 0.703
ENSBTAP00000010109-D2 Bos grunniens ENSBTAP00000010109-D2 I 0.703
ENSBTAP00000024325-D1 Bos grunniens ENSBTAP00000024325-D1 I 0.703
LCUP012241 Lucilia cuprina LCUP012241 I 0.703
GL11271 Drosophila persimilis FBgn0148880 I 0.703
TBP Gallus gallus ENSGALG00000011171 I 0.703
TBP Gorilla gorilla ENSGGOG00000011840 I 0.703
ENSGMOG00000012435 Gadus morhua ENSGMOG00000012435 I 0.703
tbp Gasterosteus aculeatus ENSGACG00000016147 I 0.703
TBP Homo sapiens ENSG00000112592 D 0.703
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.703
ENSFALG00000003238 Ficedula albicollis ENSFALG00000003238 I 0.703
ENSLACG00000005118 Latimeria chalumnae ENSLACG00000005118 I 0.703
TBP Loxodonta africana ENSLAFG00000006043 I 0.703
TBP Macaca mulatta ENSMMUG00000019917 I 0.703
TBP Monodelphis domestica ENSMODG00000005484 I 0.703
ENSMPUG00000007213 Mustela putorius furo ENSMPUG00000007213 I 0.703
TBP Myotis lucifugus ENSMLUG00000014582 I 0.703
TBP Meleagris gallopavo ENSMGAG00000012179 I 0.703
TBPL2 Loxodonta africana ENSLAFG00000017299 I 0.703
ENSLOCG00000015481 Lepisosteus oculatus ENSLOCG00000015481 I 0.703
TBP Equus caballus ENSECAG00000008516 I 0.703
ENSDORG00000011521 Dipodomys ordii ENSDORG00000011521 I 0.703
ENSAPLG00000012687 Anas platyrhynchos ENSAPLG00000012687 I 0.703
TBPL2 Bos taurus ENSBTAG00000018277 I 0.703
TBP Canis familiaris ENSCAFG00000004119 I 0.703
ENSAMXG00000003582 Astyanax mexicanus ENSAMXG00000003582 I 0.703
ENSAMXG00000000325 Astyanax mexicanus ENSAMXG00000000325 I 0.703
TBP Anolis carolinensis ENSACAG00000002576 I 0.703
ENSAMEG00000017055 Ailuropoda melanoleuca ENSAMEG00000017055 I 0.703
ENSCING00000002679 Ciona intestinalis ENSCING00000002679 I 0.703
TBPL2 Callithrix jacchus ENSCJAG00000018372 I 0.703
ENSDNOG00000037993 Dasypus novemcinctus ENSDNOG00000037993 I 0.703
ENSDNOG00000047848 Dasypus novemcinctus ENSDNOG00000047848 I 0.703
Tbpl2 Dipodomys ordii ENSDORG00000003307 I 0.703
tbp Danio rerio ENSDARG00000014994 I 0.703
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.703
TBP Callithrix jacchus ENSCJAG00000020638 I 0.703
ENSCPOG00000001188 Cavia porcellus ENSCPOG00000001188 I 0.703
Tbp Mus musculus ENSMUSG00000014767 D 0.703
ENSNLEG00000000290 Nomascus leucogenys ENSNLEG00000000290 I 0.703
Tbp Drosophila melanogaster FBgn0003687 I 0.703
Tbp Drosophila virilis FBgn0041651 I 0.703
GA22088 Drosophila pseudoobscura FBgn0082072 I 0.703
ENSXMAG00000014937 Xiphophorus maculatus ENSXMAG00000014937 I 0.703
TBP Tursiops truncatus ENSTTRG00000014825 I 0.703
TBP Taeniopygia guttata ENSTGUG00000009824 I 0.703
ENSTSYG00000001512 Tarsius syrichta ENSTSYG00000001512 I 0.703
GF11627 Drosophila ananassae FBgn0088667 I 0.703
GG20753 Drosophila erecta FBgn0112940 I 0.703
GK10649 Drosophila willistoni FBgn0212662 I 0.703
GE13685 Drosophila yakuba FBgn0231340 I 0.703
PTTG_01229 Puccinia triticina PTTG_01229 I 0.703
GJ14917 Drosophila virilis FBgn0202120 I 0.703
GD25175 Drosophila simulans FBgn0196487 I 0.703
GH23121 Drosophila grimshawi FBgn0130578 I 0.703
GM15696 Drosophila sechellia FBgn0170612 I 0.703
PTTG_06059 Puccinia triticina PTTG_06059 I 0.703
TBP Tupaia belangeri ENSTBEG00000004700 I 0.703
ENSONIG00000017061 Oreochromis niloticus ENSONIG00000017061 I 0.703
tbp Oryzias latipes ENSORLG00000010757 I 0.703
ENSPANG00000000569 Papio anubis ENSPANG00000000569 I 0.703
TBP Otolemur garnettii ENSOGAG00000013997 I 0.703
TBP Oryctolagus cuniculus ENSOCUG00000007979 I 0.703
ENSOARG00000005142 Ovis aries ENSOARG00000005142 I 0.703
ENSOARG00000021094 Ovis aries ENSOARG00000021094 I 0.703
ENSSTOG00000008402 Ictidomys tridecemlineatus ENSSTOG00000008402 I 0.703
ENSPFOG00000014770 Poecilia formosa ENSPFOG00000014770 I 0.703
ENSSHAG00000015821 Sarcophilus harrisii ENSSHAG00000015821 I 0.703
ENSSSCG00000022683 Sus scrofa ENSSSCG00000022683 I 0.703
Tbp Rattus norvegicus ENSRNOG00000001489 I 0.703
TBP Pteropus vampyrus ENSPVAG00000010820 I 0.703
ENSPSIG00000013104 Pelodiscus sinensis ENSPSIG00000013104 I 0.703
TBP Pan troglodytes ENSPTRG00000018827 I 0.703
ENSPPYG00000017192 Pongo abelii ENSPPYG00000017192 I 0.703
M438DRAFT_342525 Aureobasidium pullulans M438DRAFT_342525 I 0.701