CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AC190734.2_FG003
(
Zea mays
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
AC190734.2_FG003
T343654_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.918
0.571
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.824
0.370
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AC190734.2_FGP003
TCP
100
253
APRKDWHSKICTAGAMRDRRMRLSLDVARKFFELQDMLGFDKASKTVQWLINTSKAAIQEIMADDASSECVEDGSSSLSVDGKYNPAELGGGNEKSNGNACSEWKKPAMVRKAATTTKPPRKSGNNAHPVPDKETRAKARERARERTKEKHRMR
Links
Other
TCP
family TFs
Other
Zea mays
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
0.962
OPUNC03G28490
Oryza punctata
OPUNC03G28490
I
0.949
Sb01g010690
Sorghum bicolor
Sb01g010690
I
0.943
MLOC_70116
Hordeum vulgare
MLOC_70116
I
0.930
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I
0.929
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
0.929
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
0.929
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
0.929
ONIVA03G32600
Oryza nivara
ONIVA03G32600
I
0.918
OGLUM03G31540
Oryza glumaepatula
OGLUM03G31540
I
0.918
ORUFI03G32570
Oryza rufipogon
ORUFI03G32570
I
0.918
TB1
Oryza sativa
OS03G0706500
D
0.918
BGIOSGA013417
Oryza indica
BGIOSGA013417
I
0.918
Pavir.Ia00838
Panicum virgatum
Pavir.Ia00838
I
0.916
Pavir.Ib04362
Panicum virgatum
Pavir.Ib04362
I
0.912
Si038692m.g
Setaria italica
Si038692m.g
I
0.912
OMERI03G27910
Oryza meridionalis
OMERI03G27910
I
0.912
LPERR03G25950
Leersia perrieri
LPERR03G25950
I
0.912
OBART03G31290
Oryza barthii
OBART03G31290
I
0.908
ORGLA03G0289500
Oryza glaberrima
ORGLA03G0289500
I
0.908
OB03G38320
Oryza brachyantha
OB03G38320
I
0.907
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.900
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.846
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.846
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
0.840
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.837
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.831
Pm030202
Prunus mume
Pm030202
I
0.828
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.828
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.825
PK12240.1
Cannabis sativa
PK12240.1
D
0.824
BRC2
Arabidopsis thaliana
AT1G68800
I
0.823
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
0.823
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
0.823
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.822