TCP24 (Arabidopsis thaliana)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AT1G30210 T343675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00		 Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337		 (Direct) (Direct)
TCP24
M07272_2.00		 Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a		 (Direct) (Direct)
TCP24
M07273_2.00		 Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.981 0.951
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02499_2.00 TCP 48 141
M02499_2.00 TCP 112 165

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G30210.1 TCP 48 141
AT1G30210.1 TCP 112 165
AT1G30210.2 TCP 48 141
AT1G30210.2 TCP 112 165

Links

Other TCP family TFs
Other Arabidopsis thaliana TFs

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33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action