Bo3g071560 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo3g071560 T343737_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.838 0.450
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g071560.1 TCP 154 286

Links

Other TCP family TFs
Other Brassica oleracea TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra001710 Brassica rapa Bra001710 I 0.974
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.971
BRC1 Arabidopsis thaliana AT3G18550 I 0.967
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.965
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.965
Bo5g117410 Brassica oleracea Bo5g117410 N 0.962
Bo1g117490 Brassica oleracea Bo1g117490 I 0.961
Bra037579 Brassica rapa Bra037579 I 0.961
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.960
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.957
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.888
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.868
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.865
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.861
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.859
TCM_012252 Theobroma cacao TCM_012252 I 0.858
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.857
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.856
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.855
F775_01923 Aegilops tauschii F775_01923 I 0.854
Cla019282 Citrullus lanatus Cla019282 N 0.853
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.853
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.853
Si015230m.g Setaria italica Si015230m.g I 0.852
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.850
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.850
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.849
MDP0000224810 Malus domestica MDP0000224810 N 0.846
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.844
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.844
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.843
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.843
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.842
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.841
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.841
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.841
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.838
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.838
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.838
30174.m008721 Ricinus communis 30174.m008721 I 0.838
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.838
TB1 Oryza sativa OS03G0706500 D 0.838
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.837
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.837
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.837
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.835
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.834
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.834
OBART03G31290 Oryza barthii OBART03G31290 I 0.833
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.833
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.833
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.833
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.831
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.831
Cla018797 Citrullus lanatus Cla018797 N 0.831
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.830
MDP0000219838 Malus domestica MDP0000219838 N 0.829
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.829
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.829
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.829
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.829
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.828
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.827
Si038692m.g Setaria italica Si038692m.g I 0.827
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.827
OS09G0410500 Oryza sativa OS09G0410500 I 0.827
OBART09G10040 Oryza barthii OBART09G10040 I 0.827
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.827
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.827
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.827
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.827
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.826
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.826
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.826
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.826
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.823
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.823