Bo5g062580 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo5g062580 T343743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.974 0.743
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.973 0.757
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.973 0.757
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.973 0.757
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g062580.1 TCP 46 137
Bo5g062580.1 TCP 114 160

Links

Other TCP family TFs
Other Brassica oleracea TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.976
Bra032365 Brassica rapa Bra032365 I 0.975
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.974
TCP24 Arabidopsis thaliana AT1G30210 D 0.973
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.964
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I 0.963
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.963
OBART07G03380 Oryza barthii OBART07G03380 I 0.960
OS07G0152000 Oryza sativa OS07G0152000 I 0.954
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.954
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.953
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.953
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.953
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I 0.941
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.940
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.931
Cla020670 Citrullus lanatus Cla020670 I 0.930
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.930
mgf025386m Mimulus guttatus mgf025386m I 0.928
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.926
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.925
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.923
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.923
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.923
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.923
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I 0.922
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.918
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.917
MTR_7g015010 Medicago truncatula MTR_7g015010 I 0.907
Bo6g107240 Brassica oleracea Bo6g107240 I 0.907
mgf014960m Mimulus guttatus mgf014960m I 0.900
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.897