Bo6g103670 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo6g103670 T343749_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.947 0.641
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.903 0.379
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.881 0.418
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g103670.1 TCP 84 236

Links

Other TCP family TFs
Other Brassica oleracea TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g09488 Acanthocheilonema viteae nAv.1.0.1.g09488 I 0.000
ANCCEY_09967 Ancylostoma ceylanicum ANCCEY_09967 I 0.000
ACAC_0000050101 Angiostrongylus cantonensis ACAC_0000050101 I 0.000
ACOC_0001070801 Angiostrongylus costaricensis ACOC_0001070801 I 0.000
ALUE_0000029801 Ascaris lumbricoides ALUE_0000029801 I 0.000
ASU_11663 Ascaris suum ASU_11663 I 0.000
Bm2506 Brugia malayi Bm2506 I 0.000
BXY_1235100 Bursaphelenchus xylophilus BXY_1235100 I 0.000
CBN25704 Caenorhabditis brenneri CBN25704 I 0.000
CBG09659 Caenorhabditis briggsae CBG09659 I 0.000
mab-23 Caenorhabditis elegans WBGene00003114 D 0.000
CRE12856 Caenorhabditis remanei CRE12856 I 0.000
DICVIV_00315 Dictyocaulus viviparus DICVIV_00315 I 0.000
GPLIN_000975400 Globodera pallida GPLIN_000975400 I 0.000
HPBE_0000855101 Heligmosomoides bakeri HPBE_0000855101 I 0.000
maker-nMf.1.1.scaf01464-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01464-snap-gene-0.10 I 0.000
Minc03029 Meloidogyne incognita Minc03029 I 0.000
NECAME_10548 Necator americanus NECAME_10548 I 0.000
NBR_0001972001 Nippostrongylus brasiliensis NBR_0001972001 I 0.000
OESDEN_21377 Oesophagostomum dentatum OESDEN_21377 I 0.000
OESDEN_14521 Oesophagostomum dentatum OESDEN_14521 I 0.000
PTRK_0001067200 Parastrongyloides trichosuri PTRK_0001067200 I 0.000
RSKR_0000942000 Rhabditophanes kr3021 RSKR_0000942000 I 0.000
L596_g22821 Steinernema carpocapsae L596_g22821 I 0.000
L889_g8599 Steinernema feltiae L889_g8599 I 0.000
L893_g14864 Steinernema glaseri L893_g14864 I 0.000
L898_g15145 Steinernema monticolum L898_g15145 I 0.000
L892_g15684 Steinernema scapterisci L892_g15684 I 0.000
SPAL_0001524600 Strongyloides papillosus SPAL_0001524600 I 0.000
SSTP_0000299900 Strongyloides stercoralis SSTP_0000299900 I 0.000
SVE_0006900 Strongyloides venezuelensis SVE_0006900 I 0.000
SMUV_0000842901 Syphacia muris SMUV_0000842901 I 0.000
TCNE_0000373201 Toxocara canis TCNE_0000373201 I 0.000
WUBG_07178 Wuchereria bancrofti WUBG_07178 I 0.000