BRADI2G50687 (Brachypodium distachyon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BRADI2G50687 T343807_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC

GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.938 0.641
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC

GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.926 0.565
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC

GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.926 0.565
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD

HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.922 0.598
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN

NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.922 0.598
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.922 0.598
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.918 0.598
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.913 0.543
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN

NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.873 0.511
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC

GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.873 0.511
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN

NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.863 0.500
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH

DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.863 0.500
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN

NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.863 0.500
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC

GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.851 0.457
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.847 0.457
OS01G0213800
M11398_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.843 0.489
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G50687.1 TCP 58 235

Links

Other TCP family TFs
Other Brachypodium distachyon TFs

429 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009393 Calypte anna Aan_R009393 I 0.000
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.000
ACAC_0000851101 Angiostrongylus cantonensis ACAC_0000851101 I 0.000
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.000
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.000
Afo_R013752 Aptenodytes forsteri Afo_R013752 I 0.000
ALUE_0000465801 Ascaris lumbricoides ALUE_0000465801 I 0.000
ANCCAN_06314 Ancylostoma caninum ANCCAN_06314 I 0.000
ANCCEY_08759 Ancylostoma ceylanicum ANCCEY_08759 I 0.000
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.000
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.000
ASU_03657 Ascaris suum ASU_03657 I 0.000
ASU_03870 Ascaris suum ASU_03870 I 0.000
ASU_08381 Ascaris suum ASU_08381 I 0.000
ASU_10584 Ascaris suum ASU_10584 I 0.000
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.000
Bm4429 Brugia malayi Bm4429 I 0.000
Bm4980 Brugia malayi Bm4980 I 0.000
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.000
BTMF_0001121901 Brugia timori BTMF_0001121901 I 0.000
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.000
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.000
BXY_0810300 Bursaphelenchus xylophilus BXY_0810300 I 0.000
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.000
B_00901 Schistosoma haematobium B_00901 I 0.000
CBG03844 Caenorhabditis briggsae CBG03844 I 0.000
CBG09380 Caenorhabditis briggsae CBG09380 I 0.000
CBG10855 Caenorhabditis briggsae CBG10855 I 0.000
CBG10857 Caenorhabditis briggsae CBG10857 I 0.000
CBN15481 Caenorhabditis brenneri CBN15481 I 0.000
CBN18198 Caenorhabditis brenneri CBN18198 I 0.000
CBN20749 Caenorhabditis brenneri CBN20749 I 0.000
CBN24827 Caenorhabditis brenneri CBN24827 I 0.000
CBN28528 Caenorhabditis brenneri CBN28528 I 0.000
CJA00680 Caenorhabditis japonica CJA00680 I 0.000
CJA08896 Caenorhabditis japonica CJA08896 I 0.000
CJA37776 Caenorhabditis japonica CJA37776 I 0.000
Cmyd_10020219 Chelonia mydas Cmyd_10020219 I 0.000
CRE00149 Caenorhabditis remanei CRE00149 I 0.000
CRE00606 Caenorhabditis remanei CRE00606 I 0.000
CRE08259 Caenorhabditis remanei CRE08259 I 0.000
CRE30787 Caenorhabditis remanei CRE30787 I 0.000
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.000
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.000
DICVIV_09685 Dictyocaulus viviparus DICVIV_09685 I 0.000
DME_0000359001 Dracunculus medinensis DME_0000359001 I 0.000
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.000
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.000
ECANG7_07248 Echinococcus canadensis ECANG7_07248 I 0.000
EmuJ_000088800 Echinococcus multilocularis EmuJ_000088800 I 0.000
ENSAMEG00000011212 Ailuropoda melanoleuca ENSAMEG00000011212 I 0.000
ENSAPLG00000004548 Anas platyrhynchos ENSAPLG00000004548 I 0.000
ENSBTAP00000051129-D1 Bos grunniens ENSBTAP00000051129-D1 I 0.000
ENSCSAVG00000002688 Ciona savignyi ENSCSAVG00000002688 I 0.000
ENSFALG00000002133 Ficedula albicollis ENSFALG00000002133 I 0.000
ENSGMOG00000008794 Gadus morhua ENSGMOG00000008794 I 0.000
ENSLACG00000018630 Latimeria chalumnae ENSLACG00000018630 I 0.000
ENSLOCG00000005138 Lepisosteus oculatus ENSLOCG00000005138 I 0.000
ENSMEUG00000013509 Macropus eugenii ENSMEUG00000013509 I 0.000
ENSMPUG00000013965 Mustela putorius furo ENSMPUG00000013965 I 0.000
ENSNLEG00000017287 Nomascus leucogenys ENSNLEG00000017287 I 0.000
ENSOARG00000013368 Ovis aries ENSOARG00000013368 I 0.000
ENSONIG00000020217 Oreochromis niloticus ENSONIG00000020217 I 0.000
ENSORLG00000016492 Oryzias latipes ENSORLG00000016492 I 0.000
ENSP00000420267 Macaca fascicularis ENSP00000420267 I 0.000
ENSPANG00000025861 Papio anubis ENSPANG00000025861 I 0.000
ENSPFOG00000005783 Poecilia formosa ENSPFOG00000005783 I 0.000
ENSPPYG00000019600 Pongo abelii ENSPPYG00000019600 I 0.000
ENSPSIG00000006445 Pelodiscus sinensis ENSPSIG00000006445 I 0.000
ENSSHAG00000016733 Sarcophilus harrisii ENSSHAG00000016733 I 0.000
ENSSSCG00000023876 Sus scrofa ENSSSCG00000023876 I 0.000
ENSSTOG00000022764 Ictidomys tridecemlineatus ENSSTOG00000022764 I 0.000
ENSTSYG00000004262 Tarsius syrichta ENSTSYG00000004262 I 0.000
ENSXMAG00000009061 Xiphophorus maculatus ENSXMAG00000009061 I 0.000
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.000
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.000
gcnf Ciona intestinalis ENSCING00000005163 I 0.000
Gfo_R007909 Geospiza fortis Gfo_R007909 I 0.000
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.000
GPLIN_001122300 Globodera pallida GPLIN_001122300 I 0.000
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.000
Hba_20244 Heterorhabditis bacteriophora Hba_20244 I 0.000
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.000
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.000
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.000
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.000
HCOI01788400 Haemonchus contortus HCOI01788400 I 0.000
HmN_000254900 Hymenolepis microstoma HmN_000254900 I 0.000
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.000
HPLM_0000431601 Haemonchus placei HPLM_0000431601 I 0.000
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.000
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.000
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.000
L596_g23334 Steinernema carpocapsae L596_g23334 I 0.000
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.000
L889_g1557 Steinernema feltiae L889_g1557 I 0.000
L889_g17247 Steinernema feltiae L889_g17247 I 0.000
L889_g1891 Steinernema feltiae L889_g1891 I 0.000
L889_g22901 Steinernema feltiae L889_g22901 I 0.000
L889_g28055 Steinernema feltiae L889_g28055 I 0.000
L892_g17164 Steinernema scapterisci L892_g17164 I 0.000
L892_g17612 Steinernema scapterisci L892_g17612 I 0.000
L892_g4169 Steinernema scapterisci L892_g4169 I 0.000
L892_g5079 Steinernema scapterisci L892_g5079 I 0.000
L893_g13285 Steinernema glaseri L893_g13285 I 0.000
L893_g15276 Steinernema glaseri L893_g15276 I 0.000
L893_g28857 Steinernema glaseri L893_g28857 I 0.000
L893_g33993 Steinernema glaseri L893_g33993 I 0.000
L893_g3565 Steinernema glaseri L893_g3565 I 0.000
L898_g26357 Steinernema monticolum L898_g26357 I 0.000
L898_g4691 Steinernema monticolum L898_g4691 I 0.000
L898_g8573 Steinernema monticolum L898_g8573 I 0.000
L898_g9866 Steinernema monticolum L898_g9866 I 0.000
LOAG_00337 Loa loa LOAG_00337 I 0.000
LOAG_08615 Loa loa LOAG_08615 I 0.000
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.000
Myotis_brandtii_NR6A1_10025096 Myotis brandtii Myotis_brandtii_NR6A1_10025096 I 0.000
nAv.1.0.1.g03443 Acanthocheilonema viteae nAv.1.0.1.g03443 I 0.000
NBR_0001334401 Nippostrongylus brasiliensis NBR_0001334401 I 0.000
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.000
NBR_0001642901 Nippostrongylus brasiliensis NBR_0001642901 I 0.000
nDi.2.2.2.g01326 Dirofilaria immitis nDi.2.2.2.g01326 I 0.000
NECAME_08394 Necator americanus NECAME_08394 I 0.000
NECAME_09496 Necator americanus NECAME_09496 I 0.000
NEMVEDRAFT_v1g134436 Nematostella vectensis NEMVEDRAFT_v1g134436 I 0.000
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.000
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.000
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.000
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.000
nLs.2.1.2.g07992 Litomosoides sigmodontis nLs.2.1.2.g07992 I 0.000
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.000
nOo.2.0.1.g08426 Onchocerca ochengi nOo.2.0.1.g08426 I 0.000
NR5A1 Taeniopygia guttata ENSTGUG00000007170 I 0.000
NR5A1 Meleagris gallopavo ENSMGAG00000008342 I 0.000
NR6A1 Anolis carolinensis ENSACAG00000006870 I 0.000
NR6A1 Monodelphis domestica ENSMODG00000019748 I 0.000
Nr6a1 Mus musculus ENSMUSG00000063972 I 0.000
NR6A1 Oryctolagus cuniculus ENSOCUG00000007599 I 0.000
NR6A1 Otolemur garnettii ENSOGAG00000030677 I 0.000
NR6A1 Ochotona princeps ENSOPRG00000016686 I 0.000
NR6A1 Equus caballus ENSECAG00000021324 I 0.000
NR6A1 Pan troglodytes ENSPTRG00000021357 I 0.000
Nr6a1 Rattus norvegicus ENSRNOG00000013232 I 0.000
NR6A1 Tupaia belangeri ENSTBEG00000007008 I 0.000
nr6a1 Xenopus tropicalis XB-GENE-487592 I 0.000
NR6A1 Tursiops truncatus ENSTTRG00000017391 I 0.000
NR6A1 Bos taurus ENSBTAG00000040585 I 0.000
NR6A1 Macaca mulatta ENSMMUG00000011185 I 0.000
NR6A1 Myotis lucifugus ENSMLUG00000014714 I 0.000
NR6A1 Microcebus murinus ENSMICG00000002911 I 0.000
NR6A1 Callithrix jacchus ENSCJAG00000006631 I 0.000
NR6A1 Canis familiaris ENSCAFG00000020216 I 0.000
NR6A1 Dasypus novemcinctus ENSDNOG00000017832 I 0.000
NR6A1 Echinops telfairi ENSETEG00000012014 I 0.000
NR6A1 Felis catus ENSFCAG00000005507 I 0.000
NR6A1 Homo sapiens ENSG00000148200 D 0.000
NR6A1 Gallus gallus ENSGALG00000001073 I 0.000
NR6A1 Gorilla gorilla ENSGGOG00000009250 I 0.000
NR6A1 Loxodonta africana ENSLAFG00000011676 I 0.000
NR6A1 Cavia porcellus ENSCPOG00000005970 I 0.000
nr6a1a Takifugu rubripes ENSTRUG00000006306 I 0.000
nr6a1a Danio rerio ENSDARG00000101508 I 0.000
nr6a1a Gasterosteus aculeatus ENSGACG00000003560 I 0.000
nr6a1a Tetraodon nigroviridis ENSTNIG00000010587 I 0.000
Ocbimv22020378m.g Octopus bimaculoides Ocbimv22020378m.g I 0.000
OFLC_0000536201 Onchocerca flexuosa OFLC_0000536201 I 0.000
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.000
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.000
Ppa-unc-55 Pristionchus pacificus PPA04999 I 0.000
PPA06637 Pristionchus pacificus PPA06637 I 0.000
PPA21777 Pristionchus pacificus PPA21777 I 0.000
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.000
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.000
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.000
PTRK_0000497700 Parastrongyloides trichosuri PTRK_0000497700 I 0.000
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.000
PTRK_0000971200 Parastrongyloides trichosuri PTRK_0000971200 I 0.000
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.000
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.000
Pvit_08519 Pogona vitticeps Pvit_08519 I 0.000
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.000
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.000
Sakowv30002150m.g Saccoglossus kowalevskii Sakowv30002150m.g I 0.000
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.000
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.000
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.000
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.000
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.000
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.000
SMAR013556 Strigamia maritima SMAR013556 I 0.000
Smp_174700 Schistosoma mansoni Smp_174700 I 0.000
SMU15037562 Schmidtea mediterranea SMU15037562 I 0.000
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.000
SNAPOd2T00011859001 Oikopleura dioica SNAPOd2T00011859001 I 0.000
SNAPOd2T00013215001 Oikopleura dioica SNAPOd2T00013215001 I 0.000
SNAPOd2T00013219001 Oikopleura dioica SNAPOd2T00013219001 I 0.000
SPAL_0000110400 Strongyloides papillosus SPAL_0000110400 I 0.000
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.000
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.000
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.000
SPAL_0001408100 Strongyloides papillosus SPAL_0001408100 I 0.000
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.000
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.000
SPU_000749 Strongylocentrotus purpuratus SPU_000749 I 0.000
SROB_0001376101 Schistosoma rodhaini SROB_0001376101 I 0.000
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.000
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.000
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.000
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.000
SSTP_0000766500 Strongyloides stercoralis SSTP_0000766500 I 0.000
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.000
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.000
SSTP_0001234800 Strongyloides stercoralis SSTP_0001234800 I 0.000
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.000
SVE_0137400 Strongyloides venezuelensis SVE_0137400 I 0.000
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.000
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.000
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.000
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.000
SVE_1723700 Strongyloides venezuelensis SVE_1723700 I 0.000
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.000
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.000
TCLT_0000045701 Thelazia callipaeda TCLT_0000045701 I 0.000
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.000
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.000
TCNE_0001579701 Toxocara canis TCNE_0001579701 I 0.000
TELCIR_00680 Teladorsagia circumcincta TELCIR_00680 I 0.000
TsM_000004500 Taenia solium TsM_000004500 I 0.000
TTAC_0000076101 Hydatigera taeniaeformis TTAC_0000076101 I 0.000
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.000
WBGene00237444 Onchocerca volvulus WBGene00237444 I 0.000
XP_002159483.1 Hydra magnipapillata XP_002159483.1 I 0.000