TCP24 (Arabidopsis lyrata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 fgenesh2_kg.1__3195__AT1G30210.2 T343836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02506_2.00		 Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.981 0.926
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.981 0.926
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.981 0.926
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02506_2.00 TCP 48 144
M02506_2.00 TCP 111 165

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3195__AT1G30210.2 TCP 48 144
fgenesh2_kg.1__3195__AT1G30210.2 TCP 111 165

Links

Other TCP family TFs
Other Arabidopsis lyrata TFs

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32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action