GLYMA13G20710 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA13G20710 T343887_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.964 0.613
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.956 0.613
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.956 0.613
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.955 0.634
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.955 0.602
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.954 0.591
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.954 0.591
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.954 0.591
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.954 0.591
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.954 0.624
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.953 0.613
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.952 0.613
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.952 0.613
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.952 0.613
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.951 0.581
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.951 0.581
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.951 0.581
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.951 0.581
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.951 0.559
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.949 0.591
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.947 0.602
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.946 0.613
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.944 0.570
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.942 0.581
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.937 0.538
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.937 0.538
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.936 0.570
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.934 0.548
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.933 0.602
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.933 0.624
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.929 0.570
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.929 0.570
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.926 0.548
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.892 0.559
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.892 0.559
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G20710.2 TCP 39 182

Links

Other TCP family TFs
Other Glycine max TFs

657 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R000409 Calypte anna Aan_R000409 N 0.000
Afo_R004342 Aptenodytes forsteri Afo_R004342 N 0.000
Brh_R004716 Buceros rhinoceros Brh_R004716 N 0.000
ZBED4 Anolis carolinensis ENSACAG00000009133 N 0.000
ENSAMXG00000025839 Astyanax mexicanus ENSAMXG00000025839 N 0.000
ENSAPLG00000001579 Anas platyrhynchos ENSAPLG00000001579 N 0.000
ZBED4 Canis familiaris ENSCAFG00000000714 N 0.000
ENSCPOG00000007711 Cavia porcellus ENSCPOG00000007711 N 0.000
ENSCSAG00000019288 Chlorocebus sabaeus ENSCSAG00000019288 N 0.000
zbed4 Danio rerio ENSDARG00000024306 N 0.000
ZBED4 Dasypus novemcinctus ENSDNOG00000018932 N 0.000
ENSFALG00000015280 Ficedula albicollis ENSFALG00000015280 N 0.000
ZBED4 Homo sapiens ENSG00000100426 N 0.000
zbed4 Gasterosteus aculeatus ENSGACG00000019008 N 0.000
ENSGALG00000008547 Gallus gallus ENSGALG00000008547 N 0.000
ZBED4 Gorilla gorilla ENSGGOG00000009913 N 0.000
ENSLACG00000007168 Latimeria chalumnae ENSLACG00000007168 N 0.000
ZBED4 Loxodonta africana ENSLAFG00000017972 N 0.000
ENSLOCG00000017908 Lepisosteus oculatus ENSLOCG00000017908 N 0.000
ENSMEUG00000014660 Macropus eugenii ENSMEUG00000014660 N 0.000
ZBED4 Macaca mulatta ENSMMUG00000018833 N 0.000
ZBED4 Monodelphis domestica ENSMODG00000025433 N 0.000
ENSMPUG00000018768 Mustela putorius furo ENSMPUG00000018768 N 0.000
Zbed4 Mus musculus ENSMUSG00000034333 N 0.000
ENSNLEG00000018235 Nomascus leucogenys ENSNLEG00000018235 N 0.000
ENSOCUG00000029472 Oryctolagus cuniculus ENSOCUG00000029472 N 0.000
ZBED4 Otolemur garnettii ENSOGAG00000013251 N 0.000
ENSONIG00000009795 Oreochromis niloticus ENSONIG00000009795 N 0.000
zbed4 Oryzias latipes ENSORLG00000011603 N 0.000
ENSP00000216268 Macaca fascicularis ENSP00000216268 N 0.000
ENSPANG00000010852 Papio anubis ENSPANG00000010852 N 0.000
ENSPPYG00000011967 Pongo abelii ENSPPYG00000011967 N 0.000
ENSPSIG00000007193 Pelodiscus sinensis ENSPSIG00000007193 N 0.000
ZBED4 Pan troglodytes ENSPTRG00000014522 N 0.000
ZBED4 Pteropus vampyrus ENSPVAG00000005134 N 0.000
Zbed4 Rattus norvegicus ENSRNOG00000004588 N 0.000
ENSSTOG00000023379 Ictidomys tridecemlineatus ENSSTOG00000023379 N 0.000
zbed4 Tetraodon nigroviridis ENSTNIG00000006775 N 0.000
ZBED4 Tursiops truncatus ENSTTRG00000009815 N 0.000
ENSXMAG00000019580 Xiphophorus maculatus ENSXMAG00000019580 N 0.000
Gfo_R008679 Geospiza fortis Gfo_R008679 N 0.000
Myotis_brandtii_ZBED4_10004868 Myotis brandtii Myotis_brandtii_ZBED4_10004868 N 0.000
Pvit_16079 Pogona vitticeps Pvit_16079 N 0.000
Tal_R001537 Tyto alba Tal_R001537 N 0.000
zbed4 Xenopus tropicalis XB-GENE-6076969 N 0.000
XP_002932233 Xenopus tropicalis XP_002932233 N 0.000