GSMUA_Achr10G25520_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr10G25520_001 T343950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.843 0.447
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.842 0.368
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P25520_001 TCP 86 237

Links

Other TCP family TFs
Other Musa acuminata TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.000
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.000
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.000
29889.m003258 Ricinus communis 29889.m003258 I 0.000
30076.m004682 Ricinus communis 30076.m004682 I 0.000
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.000
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.000
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.000
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.000
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.000
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.000
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.000
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.000
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.000
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.000
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.000
F775_04823 Aegilops tauschii F775_04823 I 0.000
F775_20860 Aegilops tauschii F775_20860 I 0.000
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.000
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.000
Lus10000008.g Linum usitatissimum Lus10000008.g N 0.000
Bra009245 Brassica rapa Bra009245 N 0.000
OS08G0433400 Oryza sativa OS08G0433400 N 0.000
mgf024704m Mimulus guttatus mgf024704m N 0.000
29904.m003061 Ricinus communis 29904.m003061 N 0.000
GRMZM2G112263 Zea mays GRMZM2G112263 N 0.000
Traes_4BL_F7B9CBA99 Triticum aestivum Traes_4BL_F7B9CBA99 N 0.000
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.000
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.000