GSMUA_Achr10G25520_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr10G25520_001 T343950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.843 0.447
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.842 0.368
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P25520_001 TCP 86 237

Links

Other TCP family TFs
Other Musa acuminata TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29738.m001041 Ricinus communis 29738.m001041 I 0.846
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.838
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.843
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.825
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.857
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.845
BRC2 Arabidopsis thaliana AT1G68800 I 0.845
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.825
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.825
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.850
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.878
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.841
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.827
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.873
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.839
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.846
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.850
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.845
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.842
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.843
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.867
MDP0000173048 Malus domestica MDP0000173048 I 0.823
MDP0000272980 Malus domestica MDP0000272980 I 0.829
mgf024687m Mimulus guttatus mgf024687m I 0.832
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.836
OBART03G31290 Oryza barthii OBART03G31290 I 0.831
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.843
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.831
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.843
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.823
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.878
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.831
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.843
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.842
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.833
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.827
PK12240.1 Cannabis sativa PK12240.1 D 0.842
Pm029002 Prunus mume Pm029002 I 0.837
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.851
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.851
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.831
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.837
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.845
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.832
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.831
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.850
Si038692m.g Setaria italica Si038692m.g I 0.830
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.826
TB1 Oryza sativa OS03G0706500 D 0.843
TCM_011874 Theobroma cacao TCM_011874 I 0.847
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.836
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.836
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.836
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.836