GSMUA_Achr2G10690_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr2G10690_001 T343957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.936 0.825
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.936 0.825
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.936 0.810
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.934 0.587
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.933 0.698
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.933 0.698
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.933 0.698
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.933 0.698
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.932 0.603
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.929 0.698
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.926 0.698
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.924 0.698
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.924 0.698
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.923 0.683
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.923 0.571
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.923 0.698
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.922 0.714
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.920 0.683
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.920 0.667
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.920 0.667
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.920 0.667
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.920 0.667
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.920 0.667
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.913 0.603
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.911 0.683
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.909 0.587
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.909 0.587
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.907 0.667
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.904 0.683
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.899 0.587
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.899 0.587
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.899 0.587
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.899 0.587
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.826 0.540
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.826 0.540
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P10690_001 TCP 1 63

Links

Other TCP family TFs
Other Musa acuminata TFs

643 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.000
MSN2 Saccharomyces cerevisiae YMR037C D 0.000
MSN4 Saccharomyces cerevisiae YKL062W D 0.000
CAGL0M13189g Candida glabrata CAGL0M13189g D 0.000
CAGL0F05995g Candida glabrata CAGL0F05995g D 0.000
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.000
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I 0.000
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I 0.000
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I 0.000
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I 0.000
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I 0.000
Scas_Contig649.28 Saccharomyces castellii Scas_Contig649.28 I 0.000
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I 0.000
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.000
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.000
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.000
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.000
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I 0.000
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I 0.000
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I 0.000
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I 0.000
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I 0.000
13440_YKL062W Saccharomyces mikatae 13440_YKL062W I 0.000
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.000
SU7_2517 Saccharomyces arboricola SU7_2517 I 0.000
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.000
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.000
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.000
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I 0.000
G210_5389 Candida maltosa G210_5389 I 0.000
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.000
CTRG_03253 Candida tropicalis CTRG_03253 I 0.000
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.000
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I 0.000
KNAG_0M02310 Kazachstania naganishii KNAG_0M02310 I 0.000
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.000
SU7_1995 Saccharomyces arboricola SU7_1995 I 0.000
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I 0.000
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I 0.000
NDAI_0B01340 Naumovozyma dairenensis NDAI_0B01340 I 0.000
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I 0.000
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.000
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.000
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I 0.000
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.000