GSMUA_Achr2G22480_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr2G22480_001 T343960_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.876 0.420
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.844 0.519
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P22480_001 TCP 94 224

Links

Other TCP family TFs
Other Musa acuminata TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.950
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.908
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.908
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.908
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.904
BRC2 Arabidopsis thaliana AT1G68800 I 0.899
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.896
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.890
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.887
mgf024687m Mimulus guttatus mgf024687m I 0.882
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.881
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.881
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.881
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.879
PK12240.1 Cannabis sativa PK12240.1 D 0.876
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.874
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.874
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.874
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.874
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.874
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.873
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.870
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.866
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.866
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.866
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.866
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.866
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.866
MDP0000272980 Malus domestica MDP0000272980 I 0.862
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.862
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.860
30167.m000856 Ricinus communis 30167.m000856 I 0.859
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.859
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.858
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.858
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.854
TCM_012252 Theobroma cacao TCM_012252 I 0.853
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.852
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.852
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.851
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.850
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.849
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.848
Si033183m.g Setaria italica Si033183m.g I 0.846
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.846
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.845
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.844
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.844
TB1 Oryza sativa OS03G0706500 D 0.844
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.844
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.844
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.844
Pm030202 Prunus mume Pm030202 I 0.843
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.843
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.843
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.843
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.841
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.841
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.840
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.840
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.840
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.839
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.838
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.837
Pm015499 Prunus mume Pm015499 I 0.837
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.837
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.837
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.837
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.836
OS09G0410500 Oryza sativa OS09G0410500 I 0.836
OBART09G10040 Oryza barthii OBART09G10040 I 0.836
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.835
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.835
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.835
Bra004097 Brassica rapa Bra004097 I 0.835
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.832
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.832
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.832
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.832
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.832
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.830
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.830
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.830
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.830
Si038692m.g Setaria italica Si038692m.g I 0.829
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.829
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.829
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.829
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.828
Si015230m.g Setaria italica Si015230m.g I 0.828
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.828
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.827
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.827
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.826
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.826
OBART03G31290 Oryza barthii OBART03G31290 I 0.826
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.825
MDP0000224810 Malus domestica MDP0000224810 N 0.823
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.823
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.823
30174.m008721 Ricinus communis 30174.m008721 I 0.822
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.822