MLOC_60577 (Hordeum vulgare)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MLOC_60577 T344023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.943 0.598
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.941 0.538
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.941 0.538
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.941 0.538
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.964 0.578
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.963 0.563
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.940 0.564
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.928 0.479
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.958 0.444
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.928 0.479
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.927 0.513
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.922 0.385
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.946 0.444
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.919 0.376
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.946 0.444
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.919 0.376
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.945 0.422
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.916 0.376
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.916 0.350
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.916 0.350
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.916 0.350
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.916 0.350
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.943 0.452
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.916 0.368
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.943 0.422
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.916 0.359
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.942 0.452
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.942 0.444
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.941 0.437
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.941 0.437
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.941 0.437
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.912 0.393
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.940 0.459
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.881 0.436
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.881 0.436
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_60577.1 TCP 1 159
MLOC_60577.2 TCP 57 256
MLOC_60577.3 TCP 57 256

Links

Other TCP family TFs
Other Hordeum vulgare TFs

660 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_06056 Arthroderma benhamiae ARB_06056 N 0.000
BDDG_07814 Blastomyces dermatitidis BDDG_07814 N 0.000
ACLA_060680 Aspergillus clavatus CADACLAG00006069 N 0.000
CADAFLAG00008613 Aspergillus flavus CADAFLAG00008613 N 0.000
AFUA_3G04070 Aspergillus fumigatus CADAFUAG00000375 N 0.000
CADANGAG00000016 Aspergillus niger CADANGAG00000016 N 0.000
ANIA_09397 Aspergillus nidulans CADANIAG00001184 N 0.000
ATEG_02862 Aspergillus terreus CADATEAG00010270 N 0.000
NFIA_006380 Neosartorya fischeri CADNFIAG00000086 N 0.000
CIMG_08455 Coccidioides immitis CIMG_08455 N 0.000
CPC735_061230 Coccidioides posadasii CPC735_061230 N 0.000
EURHEDRAFT_524848 Aspergillus ruber EURHEDRAFT_524848 N 0.000
fgenesh1_pm.00771_#_439 Aspergillus carbonarius fgenesh1_pm.00771_#_439 N 0.000
H102_02756 Trichophyton rubrum H102_02756 N 0.000
H105_02773 Trichophyton soudanense H105_02773 N 0.000
HCBG_08372 Histoplasma capsulatum HCBG_08372 N 0.000
MCYG_02773 Microsporum canis MCYG_02773 N 0.000
MCYG_02773 Arthroderma otae MCYG_02773 N 0.000
PAAG_01538 Paracoccidioides sp lutzii PAAG_01538 N 0.000
PABG_03595 Paracoccidioides brasiliensis PABG_03595 N 0.000
Pc14g00630 Penicillium chrysogenum Pc14g00630 N 0.000
PCH_Pc14g00630 Penicillium rubens PCH_Pc14g00630 N 0.000
PDE_01436 Penicillium oxalicum PDE_01436 N 0.000
PDIP_67820 Penicillium digitatum PDIP_67820 N 0.000
PEX1_026460 Penicillium expansum PEX1_026460 N 0.000
PITC_090510 Penicillium italicum PITC_090510 N 0.000
PMAA_005670 Penicillium marneffei PMAA_005670 N 0.000
PMAA_005670 Talaromyces marneffei PMAA_005670 N 0.000
PVAR5_4424 Byssochlamys spectabilis PVAR5_4424 N 0.000
TEQG_04142 Trichophyton equinum TEQG_04142 N 0.000
TESG_01805 Trichophyton tonsurans TESG_01805 N 0.000
TRV_08126 Trichophyton verrucosum TRV_08126 N 0.000
TSTA_104270 Talaromyces stipitatus TSTA_104270 N 0.000
U727_00433631381 Penicillium solitum U727_00433631381 N 0.000
UREG_02530 Uncinocarpus reesii UREG_02530 N 0.000