CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_7g015010 *(Medicago truncatula)* TCP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03634 (TCP)	IPR005333	MTR_7g015010	T344047_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TCP24 M02499_2.00	Arabidopsis thaliana	NNNNRVMCVV	BBGKBYNNNN	PBM Weirauch et al.(2014) pTH7337	0.906	0.238
TCP24 M07272_2.00	Arabidopsis thaliana	GTGGGGACCAC	GTGGTCCCCAC	Dap-seq OMalley et al.(2016) TCP24_colamp_a	0.906	0.238
TCP24 M07273_2.00	Arabidopsis thaliana	NNBGGGACCACH	DGTGGTCCCVNN	Dap-seq OMalley et al.(2016) TCP24_col	0.906	0.238
TCP24 M02506_2.00	Arabidopsis lyrata	NBKKNNMMVN	NBKKNNMMVN	PBM Weirauch et al.(2014) pTH9227	0.899	0.234
For this family, TFs with SR scores > 0.822* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
KEH21680	TCP	55	216	FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKQDIDQLPPLPNFSPVGTNFNFGFPSSNELNNQQLFNFNRNNIHWEGSTSSQNSTWKSNPKEVSRELVNDKPNYLMNSTQEEENINKQGSNIEVPTATVFPNNNNMLQ
KEH21680	TCP	244	351	DAENSSQLGNNGFITSLPPMLSLSTGNSSQMMLGTTQSYFSSNVNAMEMDHHHQREIHNHHYHQMLSSSNSSQNPMTNSLNNPSFSLAKFLQNSRENSSNKEQEFTTK

Links
Other TCP family TFs
Other *Medicago truncatula* TFs