MTR_7g028160 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_7g028160 T344049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.973 0.723
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.973 0.670
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.969 0.616
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.969 0.616
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.969 0.616
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.969 0.616
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.969 0.598
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.966 0.616
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.962 0.571
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.961 0.598
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.961 0.598
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.961 0.598
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.961 0.598
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.959 0.545
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.957 0.545
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.957 0.545
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.956 0.580
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.956 0.527
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.956 0.527
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.956 0.527
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.956 0.536
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.956 0.589
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.949 0.518
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.947 0.571
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.946 0.518
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.945 0.536
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.945 0.536
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.939 0.527
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.937 0.518
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.933 0.491
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.933 0.491
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.931 0.500
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.931 0.509
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.890 0.473
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.890 0.473
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES78357 TCP 48 167

Links

Other TCP family TFs
Other Medicago truncatula TFs

654 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CAD1 Saccharomyces cerevisiae YDR423C D 0.000
YAP1 Saccharomyces cerevisiae YML007W D 0.000
AACERI_AaceriADR195C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR195C I 0.000
SU7_2487 Saccharomyces arboricola SU7_2487 I 0.000
TBLA_0G00930 Tetrapisispora blattae TBLA_0G00930 I 0.000
TDEL_0A03920 Torulaspora delbrueckii TDEL_0A03920 I 0.000
ZBAI_03740 Zygosaccharomyces bailii ZBAI_03740 I 0.000
ZBAI_09424 Zygosaccharomyces bailii ZBAI_09424 I 0.000
ZYRO0D12584g Zygosaccharomyces rouxii ZYRO0D12584g I 0.000
Scas_Contig714.56 Saccharomyces castellii Scas_Contig714.56 I 0.000
16375_YML007W Saccharomyces mikatae 16375_YML007W I 0.000
17363_Multiple Saccharomyces paradoxus 17363_Multiple I 0.000
17789_YML007W Saccharomyces bayanus 17789_YML007W I 0.000
5144_YDR423C Saccharomyces mikatae 5144_YDR423C I 0.000
5680_YDR423C Saccharomyces paradoxus 5680_YDR423C I 0.000
KLTH0G03784g Kluyveromyces thermotolerans KLTH0G03784g I 0.000
Kwal_18631 Kluyveromyces waltii Kwal_18631 I 0.000
SKUD_204302 Saccharomyces kudriavzevii SKUD_204302 I 0.000
PAS_chr4_0601 Komagataella pastoris PAS_chr4_0601 I 0.000
AGOS_ADR195C Ashbya gossypii AGOS_ADR195C I 0.000
AWRI1499_0189 Brettanomyces bruxellensis AWRI1499_0189 I 0.000
BN7_4495 Wickerhamomyces ciferrii BN7_4495 I 0.000
CAGL0F03069g Candida glabrata CAGL0F03069g I 0.000
Ecym_4064 Eremothecium cymbalariae Ecym_4064 I 0.000
KAFR_0C05400 Kazachstania africana KAFR_0C05400 I 0.000
KLLA0_A01760g Kluyveromyces lactis KLLA0_A01760g I 0.000
KLTH0G03784g Lachancea thermotolerans KLTH0G03784g I 0.000
KNAG_0B03680 Kazachstania naganishii KNAG_0B03680 I 0.000
NDAI_0C01060 Naumovozyma dairenensis NDAI_0C01060 I 0.000
NCAS_0H02560 Naumovozyma castellii NCAS_0H02560 I 0.000
LALA0_S17e00166g Lachancea lanzarotensis LALA0_S17e00166g I 0.000
KUCA_T00000686001 Kuraishia capsulata KUCA_T00000686001 I 0.000
Kpol_1023p97 Vanderwaltozyma polyspora Kpol_1023p97 I 0.000
Kpol_1004p22 Vanderwaltozyma polyspora Kpol_1004p22 I 0.000
XP_002494040.1 Pichia pastoris XP_002494040.1 I 0.000
NCAS_0F01100 Naumovozyma castellii NCAS_0F01100 N 0.000
Scas_Contig717.36 Saccharomyces castellii Scas_Contig717.36 N 0.000