OGLUM08G16380 (Oryza glumaepatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OGLUM08G16380 T344098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.830 0.411
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G16380.1 TCP 86 226

Links

Other TCP family TFs
Other Oryza glumaepatula TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TB1 Oryza sativa OS03G0706500 D 0.830
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.875
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.912
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.917
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.909
TCM_012252 Theobroma cacao TCM_012252 I 0.837
Si038692m.g Setaria italica Si038692m.g I 0.826
Si033183m.g Setaria italica Si033183m.g I 0.931
Si015230m.g Setaria italica Si015230m.g I 0.914
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.902
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.918
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.840
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.833
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.859
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.855
OS09G0410500 Oryza sativa OS09G0410500 I 0.921
OS08G0432300 Oryza sativa OS08G0432300 I 0.981
Pm015499 Prunus mume Pm015499 I 0.833
30167.m000856 Ricinus communis 30167.m000856 I 0.826
30174.m008721 Ricinus communis 30174.m008721 I 0.871
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.875
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.859
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.868
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.831
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.824
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.898
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.893
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.928
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.924
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.838
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.833
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.832
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.832
mgf024687m Mimulus guttatus mgf024687m I 0.823
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.864
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.852
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.921
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.981
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.919
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.932
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.829
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.823
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.899
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.906
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.908
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.856
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.903
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.903
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.863
F775_01923 Aegilops tauschii F775_01923 I 0.919
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.918
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.840
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.921
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.981
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.913
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.912
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.830
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.969
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.828
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.922
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.951
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.921
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.963
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.830
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.830
OBART03G31290 Oryza barthii OBART03G31290 I 0.828
OBART09G10040 Oryza barthii OBART09G10040 I 0.921
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.830
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.921
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.837
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.962
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.925
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.931
OBART08G15630 Oryza barthii OBART08G15630 N 0.957
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.859