OLONG_019922 (Oryza longistaminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OLONG_019922 T344110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.841 0.381
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.833 0.372
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.833 0.372
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.827 0.354
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_019922-R1 TCP 60 188

Links

Other TCP family TFs
Other Oryza longistaminata TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORUFI09G18080 Oryza rufipogon ORUFI09G18080 I 0.922
GSMUA_Achr4G27220_001 Musa acuminata GSMUA_Achr4G27220_001 I 0.914
GSMUA_Achr3G12320_001 Musa acuminata GSMUA_Achr3G12320_001 I 0.911
GLYMA07G29015 Glycine max GLYMA07G29015 I 0.910
Cagra.4247s0002 Capsella grandiflora Cagra.4247s0002 I 0.908
LjSGA_035107.1 Lotus japonicus LjSGA_035107.1 I 0.907
Lus10035193.g Linum usitatissimum Lus10035193.g I 0.907
evm.TU.supercontig_1815.2 Carica papaya evm.TU.supercontig_1815.2 I 0.906
GSMUA_Achr5G03320_001 Musa acuminata GSMUA_Achr5G03320_001 I 0.905
GSMUA_Achr6G07930_001 Musa acuminata GSMUA_Achr6G07930_001 I 0.903
Ca_25231 Cicer arietinum Ca_25231 I 0.903
Lus10008621.g Linum usitatissimum Lus10008621.g I 0.903
GSMUA_Achr11G17370_001 Musa acuminata GSMUA_Achr11G17370_001 I 0.903
MLOC_61513 Hordeum vulgare MLOC_61513 I 0.902
PRUPE_ppa024948mg Prunus persica PRUPE_ppa024948mg I 0.901
PGSC0003DMG400000597 Solanum tuberosum PGSC0003DMG400000597 I 0.901
Bra007875 Brassica rapa Bra007875 I 0.901
BGIOSGA015954 Oryza indica BGIOSGA015954 I 0.901
Bra003986 Brassica rapa Bra003986 I 0.899
GSMUA_AchrUn_randomG08350_001 Musa acuminata GSMUA_AchrUn_randomG08350_001 I 0.898
Si010765m.g Setaria italica Si010765m.g I 0.898
Pavir.Ca00220 Panicum virgatum Pavir.Ca00220 I 0.898
Bra029366 Brassica rapa Bra029366 I 0.896
GSMUA_Achr2G10690_001 Musa acuminata GSMUA_Achr2G10690_001 I 0.895
MLOC_24269 Hordeum vulgare MLOC_24269 I 0.895
MLOC_60577 Hordeum vulgare MLOC_60577 I 0.891
Traes_4AL_E57587E16 Triticum aestivum Traes_4AL_E57587E16 I 0.887
Pavir.J05134 Panicum virgatum Pavir.J05134 I 0.882
ORUFI01G09990 Oryza rufipogon ORUFI01G09990 I 0.875
OGLUM04G24370 Oryza glumaepatula OGLUM04G24370 N 0.873
Bra032973 Brassica rapa Bra032973 N 0.870
OLONG_002160 Oryza longistaminata OLONG_002160 I 0.866
OBART10G07150 Oryza barthii OBART10G07150 N 0.866
mgf020872m Mimulus guttatus mgf020872m I 0.863
cassava20535.m1 Manihot esculenta cassava20535.m1 I 0.863
OGLUM01G10550 Oryza glumaepatula OGLUM01G10550 I 0.857
Lus10008444.g Linum usitatissimum Lus10008444.g I 0.851
OPUNC08G20520 Oryza punctata OPUNC08G20520 I 0.841
ONIVA08G25460 Oryza nivara ONIVA08G25460 I 0.841
ORUFI08G24920 Oryza rufipogon ORUFI08G24920 I 0.841
OMERI08G17330 Oryza meridionalis OMERI08G17330 I 0.841
LPERR08G19160 Leersia perrieri LPERR08G19160 I 0.841
OGLUM08G23730 Oryza glumaepatula OGLUM08G23730 I 0.841
GRMZM2G107031 Zea mays GRMZM2G107031 I 0.841
Pavir.J12088 Panicum virgatum Pavir.J12088 I 0.841
PCF2 Oryza sativa OS08G0544800 D 0.841
PCF2 Oryza indica BGIOSGA026548 I 0.841
Gorai.007G094200 Gossypium raimondii Gorai.007G094200 I 0.840
OBART08G22390 Oryza barthii OBART08G22390 I 0.837
Cucsa.363020 Cucumis sativus Cucsa.363020 I 0.834
PK14653.1 Cannabis sativa PK14653.1 D 0.833
Pavir.J15424 Panicum virgatum Pavir.J15424 I 0.833
OB08G29160 Oryza brachyantha OB08G29160 I 0.832
GSMUA_AchrUn_randomG00900_001 Musa acuminata GSMUA_AchrUn_randomG00900_001 I 0.832
Pm018100 Prunus mume Pm018100 I 0.831
PRUPE_ppa015342mg Prunus persica PRUPE_ppa015342mg I 0.831
chr6.CM0885.180.nc Lotus japonicus chr6.CM0885.180.nc I 0.830
TCM_005447 Theobroma cacao TCM_005447 I 0.830
MLOC_49381 Hordeum vulgare MLOC_49381 I 0.829
Pm019399 Prunus mume Pm019399 I 0.828
Bostr.0556s0373 Boechera stricta Bostr.0556s0373 I 0.828
MTR_8g033070 Medicago truncatula MTR_8g033070 I 0.827
POPTR_0014s07450 Populus trichocarpa POPTR_0014s07450 I 0.827
VIT_15s0048g01150 Vitis vinifera VIT_15s0048g01150 D 0.827
29728.m000800 Ricinus communis 29728.m000800 I 0.827
Lus10032022.g Linum usitatissimum Lus10032022.g I 0.826
Bo7g084120 Brassica oleracea Bo7g084120 I 0.826
cassava16176.m1 Manihot esculenta cassava16176.m1 I 0.826
Solyc01g103780.2 Solanum lycopersicum Solyc01g103780.2 I 0.826
GLYMA07G08710 Glycine max GLYMA07G08710 I 0.826
SapurV1A.0169s0020 Salix purpurea SapurV1A.0169s0020 I 0.825
Bo9g014260 Brassica oleracea Bo9g014260 I 0.825
TCM_036394 Theobroma cacao TCM_036394 I 0.825
Ca_16417 Cicer arietinum Ca_16417 I 0.825
Bra026506 Brassica rapa Bra026506 I 0.825
GLYMA03G02090 Glycine max GLYMA03G02090 I 0.825
cassava35625.valid.m1 Manihot esculenta cassava35625.valid.m1 I 0.825
Bra000395 Brassica rapa Bra000395 I 0.825
evm.TU.supercontig_4.210 Carica papaya evm.TU.supercontig_4.210 I 0.824
PRUPE_ppa022140mg Prunus persica PRUPE_ppa022140mg I 0.824
Pm016133 Prunus mume Pm016133 I 0.824
chr5.CM0953.80.nc Lotus japonicus chr5.CM0953.80.nc I 0.824
Si039258m.g Setaria italica Si039258m.g N 0.824
BRADI4G35520 Brachypodium distachyon BRADI4G35520 I 0.824
MTR_1g101810 Medicago truncatula MTR_1g101810 I 0.823
orange1.1g014326m.g Citrus sinensis orange1.1g014326m.g I 0.823
Bra039096 Brassica rapa Bra039096 I 0.823
Ciclev10001849m.g Citrus clementina Ciclev10001849m.g I 0.823
Bo6g110290 Brassica oleracea Bo6g110290 I 0.823
Bostr.25993s0206 Boechera stricta Bostr.25993s0206 I 0.823
Ciclev10020275m.g Citrus clementina Ciclev10020275m.g I 0.823
Gorai.001G273300 Gossypium raimondii Gorai.001G273300 I 0.823
Gorai.011G086900 Gossypium raimondii Gorai.011G086900 I 0.823
30174.m008944 Ricinus communis 30174.m008944 I 0.823
cassava36888.valid.m1 Manihot esculenta cassava36888.valid.m1 I 0.823
GLYMA12G28970 Glycine max GLYMA12G28970 I 0.822
Carubv10020411m.g Capsella rubella Carubv10020411m.g I 0.822
AMTR_s00017p00035550 Amborella trichopoda AMTR_s00017p00035550 I 0.822
Thhalv10004391m.g Eutrema salsugineum Thhalv10004391m.g I 0.822
fgenesh2_kg.2__549__AT1G58100.1 Arabidopsis lyrata fgenesh2_kg.2__549__AT1G58100.1 I 0.822