OMERI08G12900 (Oryza meridionalis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OMERI08G12900 T344129_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.839 0.377
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI08G12900.1 TCP 123 340
OMERI08G12900.2 TCP 123 251

Links

Other TCP family TFs
Other Oryza meridionalis TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.965
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.963
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.962
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.960
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.960
OS08G0432300 Oryza sativa OS08G0432300 I 0.960
OBART08G15630 Oryza barthii OBART08G15630 N 0.952
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.952
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.937
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.934
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.932
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.932
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.929
Si033183m.g Setaria italica Si033183m.g I 0.928
OBART09G10040 Oryza barthii OBART09G10040 I 0.923
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.923
Si015230m.g Setaria italica Si015230m.g I 0.923
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.923
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.923
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.923
OS09G0410500 Oryza sativa OS09G0410500 I 0.923
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.923
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.921
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.920
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.920
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.919
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.917
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.917
F775_01923 Aegilops tauschii F775_01923 I 0.916
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.915
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.914
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.911
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.911
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.911
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.908
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.907
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.907
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.901
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.892
30174.m008721 Ricinus communis 30174.m008721 I 0.874
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.869
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.868
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.867
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.867
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.864
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.863
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.863
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.861
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.859
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.858
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.856
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.844
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.842
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.841
TCM_012252 Theobroma cacao TCM_012252 I 0.840
Pm015499 Prunus mume Pm015499 I 0.840
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.840
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.839
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.839
TB1 Oryza sativa OS03G0706500 D 0.839
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.839
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.839
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.838
mgf026636m Mimulus guttatus mgf026636m I 0.836
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.835
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.835
OBART03G31290 Oryza barthii OBART03G31290 I 0.835
MDP0000224810 Malus domestica MDP0000224810 N 0.834
TCM_019518 Theobroma cacao TCM_019518 I 0.833
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.832
Pm030202 Prunus mume Pm030202 I 0.831
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.831
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.831
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.831
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.830
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.828
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.828
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.826
30167.m000856 Ricinus communis 30167.m000856 I 0.825
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.825
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.825
BRC1 Arabidopsis thaliana AT3G18550 I 0.824
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.822
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.822
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.822
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.822
Bra001710 Brassica rapa Bra001710 I 0.822
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.822